 |
Job Description | P38506 | Confidence | 92.60% | Date | Thu Jan 5 11:58:11 GMT 2012 |
Rank | 51 | Aligned Residues | 76 |
% Identity | 17% | Template | d2p6ra2 |
SCOP info | Sec63 N-terminal domain-like
| Sec63 N-terminal domain-like
| Achaeal helicase C-terminal domain
|
Resolution | 3.00 |
|
 |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | W | L | D | A | P | F | I | D | K | E | F | G | V | Q | P | Q | Q | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | Y | W | G | L | A | G | I | S | S | S | K | V | P | . |
. |
G | V | A | G | I | G | P | K | S | A | T | Q | L | L | V | E |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |
|
|   |
|
|
|
|
| . | . |
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|
|   |
|   |   |
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|
Template Sequence |   |
E | E | K | D | E | D | E | I | C | A | K | Y | G | I | A | P | G | D | L | R | R | I | V | E | T | A | E | W | L | S | N | A | M | N | R | I | A | E | E | V | G | N | T | S | V | S | G | L | T | E | R | I | K | H | G | V | K | E | E | L | L | E | L | V | R | I | R | H | I | G | R | V | R | A | R | K | L | Y | N | A |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S | T | T |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
572 | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . |
  |
  |   |
|
197 | . | . | 200 | . | . | . | . | . | . | |
|
|
|
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
. |
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
F | Q | S | L | E | G | I | Y | E | N | . |
. |
. |
. |
L | D | A | V | A | E | K | W | R | K | K | L | E | T | H | K |
Query Conservation |   |
. |   |
|
|
|
|   |
|
|   |   | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
G | I | R | N | A | E | D | I | V | R | H | R | E | K | V | A | S | L | I | G | R | G | I | A | E | R | V | V | E | G | I |
Template Known Secondary structure |   |
T |
|
| S |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
652 | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|