Return to main results Retrieve Phyre Job Id

Job DescriptionP38506
Confidence20.72%DateThu Jan 5 11:58:11 GMT 2012
Rank177Aligned Residues100
% Identity13%Templated2aama1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases TM1410-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60...... ...70.........80.........90
Predicted Secondary structure 











..............






Query SS confidence 









































. . . . . . . . . . . . . .























Query Sequence  CVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDY. . . . . . . . . . . . . . KAGRPPMPEELHDEMPALRAAFEQ
Query Conservation   
      
  

    
   




        
  
 
 
..............

 
   
  
  
   
   
  
Alig confidence 




























....








..............




















.

Template Conservation       
  
    
   
   

 


  ....
           
     
                     
   .  
Template Sequence  KXINFVLEIAEYVRERKPDXLIIPQNGEN. . . . ILDFDDGQLASTVSGWAVENLFYLKTIPLEENETKSRLEYLIRL. NR
Template Known Secondary structure 
TT
BS
GG....GGGG

S
SSSSTT

.
Template Predicted Secondary structure 







....












.
Template SS confidence 















































































   178.180.........190.........200...... ...210.........220.........230.........240.........250 ..
 
   91........100. ........110.........120.........130
Predicted Secondary structure 





........






Query SS confidence 










. . . . . . . .




























Query Sequence  RGVPCWSTSGN. . . . . . . . EADDLAATLAVKVTQAGHQATIVSTDKGY
Query Conservation   

     

 ........



 

 

      
    
 
 


 
Alig confidence 








.
........




























Template Conservation   
  
  

.
                        

 



   
 
Template Sequence  KGKFILSVD. YVDDGSDSFENISRILDYYEKAKRNGCIPYAARSDLEL
Template Known Secondary structure  TT
.
SS

TTTT


Template Predicted Secondary structure 


.













Template SS confidence 















































   253......260. ........270.........280.........290.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions