Job Description P38506 Confidence 99.83% Date Thu Jan 5 11:58:11 GMT 2012 Rank 16 Aligned Residues 85 % Identity 22% Template d1xo1a1 SCOP info SAM domain-like 5' to 3' exonuclease, C-terminal subdomain 5' to 3' exonuclease, C-terminal subdomain Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		Q	P	Q	Q	L	P	D	Y	W	G	L	A	G	I	S	S	S	K	V	P	G	V	A	G	I	G	P	K	S	A	T	Q	L	L	V	E	F	Q	S	L	E	G	I	Y	E	N	L	D	A	V	A	E	.	K	W	R	K	K	L	E	T	H	K	E	M	A	F	L	C	R	D	I	A	R	L	Q	T	D	L	H
Query Conservation																																																						.
Alig confidence																																																						.																									.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		D	V	E	Q	F	I	S	L	K	A	I	M	G	D	L	G	D	N	I	R	G	V	E	G	I	G	A	K	R	G	Y	N	I	I	R	E	F	G	N	V	L	D	I	I	D	Q	L	P	L	P	G	K	Q	K	Y	I	Q	N	L	N	A	S	E	E	L	L	F	R	N	L	I	L	V	D	L	P	T	.	.	.
Template Known Secondary structure		S													B	G	G	G	T	B				T	T															S									S		S			S								T																	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	G	N	L	Q	Q	L	R	L	V
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Y	C	V	D	A	I	A	A	V
Template Known Secondary structure		.	.								T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				265	.	.	.	.	270	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions