Job Description P38506 Confidence 99.72% Date Thu Jan 5 11:58:11 GMT 2012 Rank 21 Aligned Residues 138 % Identity 19% Template d1mc8a2 SCOP info PIN domain-like PIN domain-like 5' to 3' exonuclease catalytic domain Resolution 3.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.															.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	V	H	L	L	I	V	D	A	L	N	L	I	R	R	I	H	A	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	P	C	V	E	T	C	Q	H	A	L	D	Q	L	I	M	H	S	Q	P	T	H	A	V	A	V	F	D	D	E	N	R	S	S	G	W	R	H	Q	R	L	P	D	Y
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.															.	.
Template Conservation																																																							.	.															.	.
Template Sequence		L	Y	G	K	K	I	A	I	D	A	L	N	A	I	Y	Q	F	L	S	T	I	R	Q	E	D	G	T	P	L	M	D	S	K	G	R	I	T	S	H	L	S	G	L	F	Y	R	T	I	N	L	M	E	A	.	.	G	I	K	P	A	Y	V	F	D	G	K	P	P	E	.	.	F	K	R	K	E	L	E	K	R
Template Known Secondary structure		T	T	T																		S			T	T	T				B		T	T	S		B																		.	.	T							B			S				.	.		S			S	S	S	S
Template Predicted Secondary structure																																																							.	.															.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.
		67	.	.	70	.	.	.	.	.	.																								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	G	R	P	P	M	P	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	D	E	M	P	A	L	R	A	A	F	E	Q	R	G	V	P	C	W	S	T	S	G	N	E	A	D	D	L	A	A	T	L	A	V	K	V	T	Q	A	G	H	Q	A	T	I
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.													.	.	.	.
Template Conservation																																																										.													.	.	.	.
Template Sequence		R	E	A	R	E	E	A	E	L	K	W	K	E	A	L	A	K	G	N	L	E	E	A	R	K	Y	A	Q	R	A	T	K	V	N	E	M	L	I	E	D	A	K	K	L	L	Q	L	M	G	I	P	I	I	Q	A	P	.	S	E	G	E	A	Q	A	A	Y	M	A	S	.	.	.	.	K	G	D	V	Y	A	S
Template Known Secondary structure			S		S	S			S	S	S	S	S	S		G	G	G	T	T	T	S		T	T	T	T	T	T	T	T																			T					B		S	.	S											T	.	.	.	.	T	T	S		S
Template Predicted Secondary structure																																																										.													.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	T	D	K	G	Y	C	Q	L	L	S	P	T	L	R	I	R	D	Y	F	Q	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	Q	D	Y	D	S	L	L	F	G	A	P	R	L	I	R	N	L	T	I	T	G	K
Template Known Secondary structure				S	S	T					T	T		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions