Job Description P38506 Confidence 99.77% Date Thu Jan 5 11:58:11 GMT 2012 Rank 18 Aligned Residues 137 % Identity 20% Template d1b43a2 SCOP info PIN domain-like PIN domain-like 5' to 3' exonuclease catalytic domain Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20															.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	V	H	L	L	I	V	D	A	L	N	L	I	R	R	I	H	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	S	P	C	V	E	T	C	Q	H	A	L	D	Q	L	I	M	H	S	Q	P	T	H	A	V	A	V	F	D	D	E	N	R	S	S	G	W	R	H	Q	R	L	P	D	Y
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																.	.
Template Conservation																																																						.	.																.	.
Template Sequence		L	Y	G	K	K	I	A	I	D	A	L	N	A	I	Y	Q	F	L	S	T	I	R	Q	K	D	G	T	P	L	M	D	S	K	G	R	I	T	S	H	L	S	G	L	F	Y	R	T	I	N	L	M	E	.	.	A	G	I	K	P	V	Y	V	F	D	G	E	P	P	E	.	.	F	K	K	K	E	L	E	K	R
Template Known Secondary structure		G	T	T																		S	B		T	T	S		B		B		T	T	S		B																	.	.	T	T										S				.	.		S	S		S	S	T	T
Template Predicted Secondary structure																																																						.	.																.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.
		67	.	.	70	.	.	.	.	.	.	.																								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	G	R	P	P	M	P	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	E	M	P	A	L	R	A	A	F	E	Q	R	G	V	P	C	W	S	T	S	G	N	E	A	D	D	L	A	A	T	L	A	V	K	V	T	Q	A	G	H	Q	A	T	I
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.													.	.	.	.
Template Conservation																																																											.													.	.	.	.
Template Sequence		R	E	A	R	E	E	A	E	E	K	W	R	E	A	L	E	K	G	E	I	E	E	A	R	K	Y	A	Q	R	A	T	R	V	N	E	M	L	I	E	D	A	K	K	L	L	E	L	M	G	I	P	I	V	Q	A	P	S	.	E	G	E	A	Q	A	A	Y	M	A	A	K	.	.	.	.	G	S	V	Y	A	S
Template Known Secondary structure					T	T													S											T	S	G	G	G	T															T							S	S	.													.	.	.	.	T	S	S	S
Template Predicted Secondary structure																																																											.													.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	T	D	K	G	Y	C	Q	L	L	S	P	T	L	R	I	R	D	Y	F	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	Q	D	Y	D	S	L	L	F	G	A	P	R	L	V	R	N	L	T	I	T	G
Template Known Secondary structure				S	S	S					T	T		S					S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions