Return to main results Retrieve Phyre Job Id

Job DescriptionP38506
Confidence99.57%DateThu Jan 5 11:58:11 GMT 2012
Rank24Aligned Residues58
% Identity22%Templated1a77a1
SCOP infoSAM domain-like 5' to 3' exonuclease, C-terminal subdomain 5' to 3' exonuclease, C-terminal subdomain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190.........200.........210........
Predicted Secondary structure 



















Query SS confidence 


























































Query Sequence  VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL
Query Conservation 
 
    
   
 

 






 


 


  

   



 

        
    
Alig confidence 













.











































Template Conservation 

  
 

  

 
. 






 






 


   



 
              
Template Sequence  ISLDDLIDIAIFMG. TDYNPGGVKGIGFKRAYELVRSGVAKDVLKKEVEYYDEIKRIFK
Template Known Secondary structure 


.
TTSTT
STT

TT

TT
Template Predicted Secondary structure 


.















Template SS confidence 


























































   209210.........220.. .......230.........240.........250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions