Job Description P38506 Confidence 100.00% Date Thu Jan 5 11:58:11 GMT 2012 Rank 12 Aligned Residues 241 % Identity 16% Template c3qeaZ_ PDB info PDB header:hydrolase/dna Chain: Z: PDB Molecule:exonuclease 1; PDBTitle: crystal structure of human exonuclease 1 exo1 (wt) in complex with dna2 (complex ii) Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.									.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.														.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	V	H	L	L	I	V	D	A	L	N	L	I	R	R	I	H	A	V	Q	.	.	.	.	.	.	.	.	G	S	P	C	V	E	T	C	Q	H	A	L	D	Q	L	I	M	H	S	Q	P	T	H	A	V	A	V	F	D	D	E	N	R	S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R
Query Conservation																							.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																							.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		Y	K	G	Q	V	V	A	V	D	T	Y	C	W	L	H	K	G	A	I	A	C	A	E	K	L	A	K	G	E	P	T	D	R	Y	V	G	F	C	M	K	F	V	N	M	L	L	S	H	G	I	K	.	P	I	L	V	F	D	G	C	T	L	P	S	K	K	E	V	E	R	S	R	R	E	R	R	Q	A	N	L
Template Known Secondary structure		G	T	T	S																T	T						T	T																				T	T			.								S			T	T	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80									.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		H	Q	R	L	P	D	Y	K	A	G	R	P	P	M	P	E	E	L	H	D	E	.	.	.	.	.	.	.	.	M	P	A	L	R	A	A	F	E	Q	R	G	V	P	C	W	S	T	S	G	N	E	A	D	D	L	A	A	T	L	A	V	K	V	T	Q	A	G	H	Q	A	T	I	V	S	T	D	K	G	Y	C
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																				.													.	.	.	.
Template Conservation																																																		.													.	.	.	.
Template Sequence		L	K	G	K	Q	L	L	R	E	G	K	V	S	E	A	R	E	C	F	T	R	S	I	N	I	T	H	A	M	A	H	K	V	I	K	A	A	R	S	Q	G	V	D	C	L	V	A	P	.	Y	E	A	D	A	Q	L	A	Y	L	N	K	.	.	.	.	A	G	I	V	Q	A	I	I	T	E	D	S	D	L	L
Template Known Secondary structure								T	T	T	T			T	T						G	G	G																	T	T	T							S	.	S												.	.	.	.	T	T	S		S					S		G	G	G	G
Template Predicted Secondary structure																																																		.													.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.																																																						.	.
Query SS confidence																					.	.	.	.	.	.																																																						.	.
Query Sequence		Q	L	L	S	P	T	L	R	I	R	D	Y	F	Q	K	R	W	L	D	.	.	.	.	.	.	A	P	F	I	D	K	E	F	G	V	Q	P	Q	Q	L	P	D	Y	W	G	L	A	G	I	S	S	S	K	V	P	G	V	A	G	I	G	P	K	S	A	T	Q	L	L	V	E	F	Q	S	L	E	G	I	.	.
Query Conservation																					.	.	.	.	.	.																																																						.	.
Alig confidence																					.	.	.	.	.	.																								.	.																													.	.
Template Conservation																																																		.	.
Template Sequence		A	F	G	C	K	K	V	I	L	K	M	D	Q	F	G	N	G	L	E	I	D	Q	A	R	L	G	M	C	R	Q	L	G	D	V	F	T	E	E	K	F	R	Y	M	C	I	L	S	G	.	.	C	D	Y	L	S	S	L	R	G	I	G	L	A	K	A	C	K	V	L	R	L	A	N	N	P	D	I	V	K	V
Template Known Secondary structure		G	G	T		S					S			T	T	S							G	G	G	G	G	G		T	T	T	T	T	T	T	S													.	.		S	S	S				T	T																S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
					204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.												.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure		.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	Y	E	N	L	D	A	V	A	E	K	W	R	K	K	L	E	T	H	K	E	M	A	F	L	.	.	.	.	.	.	.	.	.	.	.	C	R	D	I	A	R	L	Q	T	D	L	H	I	D	G	N	L	Q	Q	L	R	L	V
Query Conservation		.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																									.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																															.
Template Sequence		I	K	K	I	G	H	Y	L	K	M	N	I	T	V	P	E	D	Y	I	N	G	F	I	R	A	N	N	T	F	L	Y	Q	L	V	F	D	P	I	K	R	K	L	I	P	L	.	N	A	Y	E	D	D	V	D	P	E	T	L	S	Y	A
Template Known Secondary structure			T	T					T	T	S																											T	T	T	T					S	.	S				T	T			G	G	G		G	G	G
Template Predicted Secondary structure																																															.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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