Job Description P38506 Confidence 100.00% Date Thu Jan 5 11:58:11 GMT 2012 Rank 10 Aligned Residues 178 % Identity 20% Template c2izoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flap structure-specific endonuclease; PDBTitle: structure of an archaeal pcna1-pcna2-fen1 complex Resolution 2.9 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.												.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	H	L	L	I	V	D	A	L	N	L	I	R	R	I	H	A	V	Q	.	.	.	.	.	.	.	.	.	.	.	G	S	P	C	V	E	T	C	Q	H	A	L	D	Q	L	I	M	H	S	Q	P	T	H	A	V	A	V	F	D	D	E	N	R	S	S	G	W	R	H	Q	R	L	P	D	Y	K	A	G	R
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	K	R	V	S	I	D	G	Y	N	A	L	Y	Q	F	L	A	A	I	R	Q	P	P	L	M	D	S	Q	G	R	V	T	S	H	L	S	G	L	F	Y	R	T	I	N	I	L	E	E	.	.	G	V	I	P	I	Y	V	F	D	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T																	S							B		S	S	S		B																		.	.	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		P	P	M	P	E	E	L	H	D	E	M	P	A	L	R	A	A	F	E	Q	R	G	V	P	C	W	S	T	S	G	N	E	A	D	D	L	A	A	T	L	A	V	K	V	T	Q	A	G	H	Q	A	T	I	V	S	T	D	K	G	Y	C	Q	L	L	S	P	T	L	R	I	.	.	.	.	R	D	Y	F	Q	K
Query Conservation																																																																								.	.	.	.
Alig confidence		.	.	.	.	.	.	.																							.														.	.	.	.																								.	.	.	.
Template Conservation		.	.	.	.	.	.	.																							.														.	.	.	.
Template Sequence		.	.	.	.	.	.	.	N	I	M	V	E	E	S	K	K	L	L	R	A	M	G	I	P	I	V	Q	A	P	.	S	E	G	E	A	E	A	A	Y	L	N	K	L	.	.	.	.	G	L	S	W	A	A	A	S	Q	D	Y	D	A	I	L	F	G	A	K	R	L	V	R	N	L	T	I	Y	V	E	I	K	P
Template Known Secondary structure		.	.	.	.	.	.	.															T							S	.	S												T	.	.	.	.	T	S	S	S					S	S	S					T	T		S					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																							.														.	.	.	.
Template SS confidence
									126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		R	W	L	D	A	P	F	I	D	K	E	F	G	V	Q	P	Q	Q	L	P	D	Y	W	G	L	A	G	I	S	S	S	K	V	.	P	G	V	A	G	I	G	P	K	S	A	T	Q	L	L	V	E	F	Q	S	L	E	G	I	Y	E	N	L	D	A	V	A	E	K
Query Conservation																																			.
Alig confidence																													.	.					.
Template Conservation																													.	.
Template Sequence		E	L	I	E	T	E	I	L	L	K	K	L	G	I	T	R	E	Q	L	I	D	I	G	I	L	I	G	.	.	T	D	Y	N	P	D	G	I	R	G	I	G	P	E	R	A	L	K	I	I	K	K	Y	G	K	I	I	D	E	I	R	G	L	F	L	N	P	Q	V
Template Known Secondary structure														T															.	.		S	S	S	T	T		S	T	T													S	S				T	T							S
Template Predicted Secondary structure																													.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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