Return to main results Retrieve Phyre Job Id

Job DescriptionP38506
Confidence85.34%DateThu Jan 5 11:58:11 GMT 2012
Rank68Aligned Residues26
% Identity35%Templatec2bcuA_
PDB info PDB header:transferase, lyase/dnaChain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   181........190...... ...200......
Predicted Secondary structure 





.


Query SS confidence 















.









Query Sequence  GVAGIGPKSATQLLVE. FQSLEGIYEN
Query Conservation 

 


 


  

  . 



 

  
Alig confidence 















.









Template Conservation   
 






      

 




   
Template Sequence  NIWGAGTKTAQMWYQQGFRSLEDIRSQ
Template Known Secondary structure  TSTT

TT

S
Template Predicted Secondary structure 










Template SS confidence 


























   340.........350.........360......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions