Job Description P38506 Confidence 100.00% Date Thu Jan 5 11:58:11 GMT 2012 Rank 11 Aligned Residues 227 % Identity 21% Template c1ul1Y_ PDB info PDB header:hydrolase/dna binding protein Chain: Y: PDB Molecule:flap endonuclease-1; PDBTitle: crystal structure of the human fen1-pcna complex Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	V	H	L	L	I	V	D	A	L	N	L	I	R	R	I	H	A	V	Q	G	S	P	C	V	E	T	C	Q	H	A	L	D	Q	L	I	M	H	S	Q	P	T	H	A	V	A	V	F	D	D	E	N	R	S	S	G	W	R	H	Q	R	L	P	D	Y	K	A	G	R	P	P	M	P	E	E	L	H	D	E
Query Conservation
Alig confidence																					.	.																		.	.																.	.														.	.	.	.	.	.	.	.
Template Conservation																					.	.																		.	.																.	.														.	.	.	.	.	.	.	.
Template Sequence		Y	F	G	R	K	V	A	I	D	A	S	M	S	I	Y	Q	F	L	I	.	.	T	T	S	H	L	M	G	M	F	Y	R	T	I	R	M	M	E	.	.	N	G	I	K	P	V	Y	V	F	D	G	K	P	P	Q	.	.	L	K	S	G	E	L	A	K	R	S	E	T	K	.	.	.	.	.	.	.	.	Q	H
Template Known Secondary structure		G	T	T																	.	.																		.	.	T	T										S				.	.		T	T	G	G	G	G	G	G	T			T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.																		.	.																.	.														.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.									90	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		M	P	A	L	R	A	A	F	E	Q	R	G	V	P	C	W	S	T	S	G	N	E	A	D	D	L	A	A	T	L	A	V	K	V	T	Q	A	G	H	Q	A	T	I	V	S	T	D	K	G	Y	C	Q	L	L	S	P	T	L	R	I	R	D	Y	F	Q	K	.	.	.	.	.	.	R	W	L	D	A	P	F	I
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence																					.													.	.	.	.																															.	.	.	.	.	.
Template Conservation																					.													.	.	.	.
Template Sequence		N	D	E	C	K	H	L	L	S	L	M	G	I	P	Y	L	D	A	P	.	S	E	A	E	A	S	C	A	A	L	V	K	.	.	.	.	A	G	K	V	Y	A	A	A	T	E	D	M	D	C	L	T	F	G	S	P	V	L	M	R	H	L	T	A	S	E	A	K	K	L	P	I	Q	E	F	H	L	S	R	I
Template Known Secondary structure				T					T	T	T	T	T							S	.	S											T	.	.	.	.	T	T	S	S	S					S	S	T					T	T		S					S	T	T	S		S	S	S
Template Predicted Secondary structure																					.													.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		D	K	E	F	G	V	Q	P	Q	Q	L	P	D	Y	W	G	L	A	G	I	S	S	S	K	V	P	G	V	A	G	I	G	P	K	S	A	T	Q	L	L	V	E	F	Q	S	L	E	G	I	Y	E	N	L	D	A	V	A	E	K	W	R	K	K	L	E	T	H	K	.	E	M	A	F	L	C	R	D	I	A	R
Query Conservation																																																																						.
Alig confidence																					.	.																																																.
Template Conservation																					.	.
Template Sequence		L	Q	E	L	G	L	N	Q	E	Q	F	V	D	L	C	I	L	L	G	.	.	S	D	Y	C	E	S	I	R	G	I	G	P	K	R	A	V	D	L	I	Q	K	H	K	S	I	E	E	I	V	R	R	L	D	P	N	K	Y	P	V	P	E	N	W	L	H	K	E	A	H	Q	L	F	L	E	P	E	V	L	D
Template Known Secondary structure					T	T															.	.		S	S	S				S	S													S	S	S								S		S	T	T	S				T	T			T	T						T	T	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		234	.	.	.			.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		L	Q	T	D	.	.	L	H	I	D	G	N	L	Q	Q	L	R
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		P	E	S	V	E	L	K	W	S	E	P	N	E	E	E	L	I
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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