|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | I | T | L | I | S | G | S | T | L | G | G | A | E | Y | V | A | E | H | L | A | E | K | L | E | E | A | G | F | T | T | E | T | L | H | G | P | L | L | E | D | L | P | A | S | G | I | W | L | V | I | S | S | T | H | G | A | G | D | I | P | D | N | L | S | P | F | Y | E | A | L | Q | E | Q | K | P | D | L | S |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |   |
|   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
Template Conservation |   |
|
|
|   |
|   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . |   |
Template Sequence |   |
K | K | I | G | L | F | Y | G | T | Q | T | G | K | T | E | S | V | A | E | I | I | R | D | E | F | G | N | D | V | V | T | L | H | D | V | S | Q | A | E | V | T | D | L | N | D | Y | Q | Y | L | I | I | G | C | P | T | L | N | I | G | E | L | Q | S | D | W | E | G | L | Y | S | E | L | D | D | V | D | F | . |
. |
N |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |  | T | T | T |
|
| G | G | G | G | G | G |
| S |  |  |  |  |  |  |  |  |  | T | T | T |  |  |
|  |  |  |  |  |  |  | T | T | G | G | G |
|
|
| . | . | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1002 | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | |
|
. |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
A | V | R | F | G | A | I | G | I | G | S | R | E | Y | . |
. |
D | T | F | C | G | A | I | D | K | L | E | A | E | L | K | N | S | G | A | K | Q | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | E | T | L | K | I | N | I | L | D | H | D | I | P | . |
E | D | P | A | E | E | W |
Query Conservation |   |
|   |   |   |
|
|
|
|   |
|
|   |   |
| . | . |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
G | K | L | V | A | Y | F | G | T | G | D | Q | I | G | Y | A | D | N | F | Q | D | A | I | G | I | L | E | E | K | I | S | Q | R | G | G | K | T | V | G | Y | W | S | T | D | G | Y | D | F | N | D | S | K | A | L | R | N | G | K | F | V | G | L | A | L | D | E | D | N | Q | S | D | L | T | D | D | R | I | K | S | W |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |
|
| T | T | T | T | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
|
|  |  |
| T | T |
|
|
| S |
|
| T | T |  |  | T | T |  |  | S | S |  |  |  |
| T | T | T |
| G | G | G |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
139 | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | S | W | V | N | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|   |
Template Sequence |   |
V | A | Q | L | K | S | E | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
1160 | . | . | . | . | . | . | . |
  |