Return to main results Retrieve Phyre Job Id

Job DescriptionP03817
Confidence99.95%DateThu Jan 5 10:58:00 GMT 2012
Rank14Aligned Residues143
% Identity21%Templated1oboa_
SCOP infoFlavodoxin-like Flavoproteins Flavodoxin-related
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  ADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLPASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLS
Query Conservation    
 
 
 
  
 

  
  
   
   
  
                 
    
   
  
     
   
        
Alig confidence 












































































..
Template Conservation 


 
 
 
 




 

  

  
                       

    
   
  
         
     .. 
Template Sequence  KKIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDYQYLIIGCPTLNIGELQSDWEGLYSELDDVDF. . N
Template Known Secondary structure 
S

SSS
TTTTTT

GGGGGG
STTT
TTGGG


..T
Template Predicted Secondary structure 






























..
Template SS confidence 















































































   1002.......1010.........1020.........1030.........1040.........1050.........1060.........1070........ .
 
   82.......90..... ....100.........110....... ..120.........130. .......
Predicted Secondary structure 





..


....................








.
Query SS confidence 













. .





















. . . . . . . . . . . . . . . . . . . .













.






Query Sequence  AVRFGAIGIGSREY. . DTFCGAIDKLEAELKNSGAKQT. . . . . . . . . . . . . . . . . . . . GETLKINILDHDIP. EDPAEEW
Query Conservation 
   



 

  
..  
      
   
   
   
.................... 
    
       .      
Alig confidence 













..





















....................













.






Template Conservation   
  



 

   
   
  
   
   
   

  

     
     
 
       

 

           
  
Template Sequence  GKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYWSTDGYDFNDSKALRNGKFVGLALDEDNQSDLTDDRIKSW
Template Known Secondary structure  T


TTTTTTSTTTT




TT


S

TTTTSS
TTT
GGG
Template Predicted Secondary structure 






































Template SS confidence 















































































   1080.........1090.........1100.........1110.........1120.........1130.........1140.........1150.........
 
   139140......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  LGSWVNLL
Query Conservation         
Alig confidence 







Template Conservation 
  

 
 
Template Sequence  VAQLKSEF
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   1160.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions