Return to main results Retrieve Phyre Job Id

Job DescriptionP03817
Confidence53.00%DateThu Jan 5 10:58:00 GMT 2012
Rank109Aligned Residues73
% Identity21%Templated1iowa1
SCOP infoPreATP-grasp domain PreATP-grasp domain D-Alanine ligase N-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.... .....20.........30........ .40.........50.........60.........70...
Predicted Secondary structure 

.


...





..













Query SS confidence 

.











. . .























. .


































Query Sequence  MA. DITLISGSTLGG. . . AEYVAEHLAEKLEEAGFTTETLHG. . PLLEDLPASGIWLVISSTHGAGDIPDNLSPFYEAL
Query Conservation 
 . 
 
 
 
  
 ...

  
  
   
   
  
     ..            
    
   
  
     
   
Alig confidence 

.











...























..


































Template Conservation 
   
 

 

 
 
  


 

  
  

      
  
         
     
 

  


  



 

 


  
Template Sequence  MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELM
Template Known Secondary structure 





SSTTTT

TTTS
GGGTTTTT


STTTSSS
Template Predicted Secondary structure 































Template SS confidence 














































































   1........10.........20.........30.........40.........50.........60.........70.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions