Job Description P03817 Confidence 98.80% Date Thu Jan 5 10:58:00 GMT 2012 Rank 48 Aligned Residues 146 % Identity 12% Template c3rpeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:modulator of drug activity b; PDBTitle: 1.1 angstrom crystal structure of putative modulator of drug activity2 (mdab) from yersinia pestis co92. Resolution 1.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																										.	.	.				.	.	.	.
Query SS confidence																.	.	.	.	.	.																										.	.	.				.	.	.	.
Query Sequence		M	A	D	I	T	L	I	S	G	S	T	L	G	G	.	.	.	.	.	.	A	E	Y	V	A	E	H	L	A	E	K	L	E	E	A	G	F	T	T	E	T	L	H	G	P	.	.	.	L	L	E	.	.	.	.	D	L	P	A	S	G	I	W	L	V	I	S	S	T	H	G	A	G	D	I	P	D	N	L	S
Query Conservation																.	.	.	.	.	.																										.	.	.				.	.	.	.
Alig confidence																.	.	.	.	.	.																										.	.	.				.	.	.	.																.
Template Conservation																																																																								.
Template Sequence		M	S	N	V	L	I	I	N	A	M	K	E	F	A	H	S	K	G	A	L	N	L	T	L	T	N	V	A	A	D	F	L	R	E	S	G	H	Q	V	K	I	T	T	V	D	Q	G	Y	D	I	E	S	E	I	E	N	Y	L	W	A	D	T	I	I	Y	Q	M	P	A	W	.	W	M	G	E	P	W	I	L	K
Template Known Secondary structure														B	T	T	B		S																	T	T								G	G	G															S									B	.	T	T	B
Template Predicted Secondary structure																																																																								.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.
		68	.	70	.	.	.																							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.													100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	Y	E	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	Q	K	P	D	L	S	A	V	R	F	G	A	I	G	I	G	S	R	E	Y	D	T	F	C	.	.	.	.	.	.	.	.	.	.	.	.	G	A	I	D	K	L	E	A	E	L	K	N	S	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	I	D	E	V	F	T	D	G	H	G	R	L	Y	Q	S	D	G	R	T	R	S	D	A	T	K	G	Y	G	S	G	G	L	I	Q	G	K	T	Y	M	L	S	V	T	W	N	A	P	R	E	A	F	T	D	P	E	Q	F	F	H	G	V	G	V	D	G	V	Y	L	P	F	H	K	A	N	Q	F	L	G
Template Known Secondary structure											T	B	T	T	T	B				S			S	T	T	T	T	S		T	T			B	S		T	T										S	S		T						T	T	S	T	T	T	T							T										T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q	T	G	E	T	L	K	I	N	I	L	D	H	D	I	P	E	D	P	A	E	E	W	L	G	S	W	V	N	L	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	P	L	P	T	F	M	C	N	D	V	I	K	Q	P	D	I	E	G	D	I	A	R	Y	R	Q	H	L	A	E	N	V	N
Template Known Secondary structure												S	T	T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions