 |
Job Description | P03817 | Confidence | 61.92% | Date | Thu Jan 5 10:58:00 GMT 2012 |
Rank | 98 | Aligned Residues | 132 |
% Identity | 13% | Template | c3kxqB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:triosephosphate isomerase; |
PDBTitle: crystal structure of triosephosphate isomerase from bartonella2 henselae at 1.6a resolution
|
Resolution | 1.60 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | D | I | T | L | I | S | G | S | T | L | G | G | A | E | Y | V | A | E | H | L | A | E | K | L | E | E | A | G | F | T | T | E | T | L | H | . |
. |
. |
. |
G | P | L | L | E | D | L | P | A | S | G | I | W | L | V | I | S | . |
. |
. |
S | T | H | G | A | G | D | I | P | D | N | L | S | P | F | Y | E | A | L |
Query Conservation |   |
|   |   |
|   |
|   |
|   |
|   |   |
|   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|
|
|
|
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |
|
|   |
|
|
|
|
|
| . | . |   |
|
|
Template Sequence |   |
I | R | P | F | I | A | G | N | W | K | M | N | G | T | . |
G | E | S | L | G | E | L | R | A | I | A | A | G | I | S | F | E | A | L | I | C | V | P | A | T | L | L | S | R | A | F | D | I | L | G | G | E | N | I | L | L | G | G | Q | N | C | H | F | D | D | Y | G | P | Y | T | G | D | I | S | A | . |
. |
F | M | L |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
|
| S |
|
|
| . | G | G | G |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| T | T | T |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  | S |
|
|
| S | S | S | S | S | S |
| T | T |
|
|
|  | . | . |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
. | 80 | . |
  |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | Q | K | P | D | L | S | A | V | R | F | G | A | I | G | I | G | S | R | E | Y | D | T | . |
. |
. |
F | C | G | A | I | D | K | L | E | A | E | L | K | N | S | G | A | K | Q | T | G | E | T | L | K | I | N | I | L | D | H | D | I | P | E | D | P | A | E | E | W | L | G | S | W | V | N | L | L | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|   |   |
|   |   | . | . | . |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . | . | . | . |   |
|   |   |   |
|
|
|
| . | . | . | . |
|
|
|
|
|   |   |
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
| . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
K | E | . |
. |
. |
. |
. |
A | G | A | S | H | V | I | I | G | . |
. |
. |
. |
H | S | E | R | R | T | V | Y | Q | E | S | D | A | I | V | R | A | K | V | Q | A | A | W | R | A | G | L | V | A | L | I | C | V | . |
. |
. |
G | E | T | L | E | E | R | K | S | N | K | V | L | D | V | L | T | R | Q | L | E |
Template Known Secondary structure |   |
 |  | . | . | . | . | . |  | T |
| S |  |  |  |  | S | . | . | . | . |
|  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  | . | . | . | . | . |
|
|
|
|  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | |
|
|
|
|
90 | . | . | . | . | . | . | . | . | |
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|