Job Description P03817 Confidence 99.95% Date Thu Jan 5 10:58:00 GMT 2012 Rank 13 Aligned Residues 146 % Identity 22% Template c2wc1A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:flavodoxin; PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a Resolution 2.17 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																	.																																											.	.	.	.	.	.
Query SS confidence																																	.																																											.	.	.	.	.	.
Query Sequence		M	A	D	I	T	L	I	S	G	S	T	L	G	G	A	E	Y	V	A	E	H	L	A	E	K	L	E	E	A	G	F	.	T	T	E	T	L	H	G	P	L	L	E	D	L	P	A	S	G	I	W	L	V	I	S	S	T	H	G	A	G	D	I	P	D	N	L	S	P	F	Y	E	A	L	.	.	.	.	.	.
Query Conservation																																	.																																											.	.	.	.	.	.
Alig confidence																																	.																																											.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	K	I	G	L	F	F	G	S	D	T	G	T	T	R	K	I	A	K	Q	I	K	D	M	F	D	D	E	V	M	A	K	P	L	N	V	N	R	A	D	V	A	D	F	M	A	Y	D	F	L	I	L	G	T	P	T	L	G	D	G	Q	L	P	G	L	S	A	N	A	A	S	E	S	W	E	E	F	L	P
Template Known Secondary structure				S								S	S	S											T	T	S		T	T	T	B						G	G	G										S									B	T	T	T	B		S	S	G	G	G	T		S	S							G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																					120	.	.	.	.	.	.		.	.	.	130
Predicted Secondary structure																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		Q	E	Q	K	P	D	L	S	A	V	R	F	G	A	I	G	I	G	S	R	E	Y	.	.	D	T	F	C	G	A	I	D	K	L	E	A	E	L	K	N	S	G	A	K	Q	T	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	K	I	N	I	L	.	D	H	D	I
Query Conservation																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		R	I	A	D	Q	D	F	S	G	K	T	I	A	L	F	G	L	G	D	Q	V	T	Y	P	L	E	F	V	N	A	L	F	F	L	H	E	F	F	S	D	R	G	A	N	V	V	G	R	W	P	A	K	G	Y	G	F	E	D	S	L	A	V	V	E	G	E	F	L	G	L	A	L	D	Q	D	N	Q	A	A	L
Template Known Secondary structure		G	G	T	T				T	T											T	T	T		T	T	S	T	T	T											T	T	T										T	T	S			S			T	T			T	T			S	S					T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	D	P	A	E	E	W	L	G	S	W	V	N	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	E	R	L	K	G	W	L	S	L	I	A	A	D	F
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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