Job Description P03817 Confidence 98.24% Date Thu Jan 5 10:58:00 GMT 2012 Rank 64 Aligned Residues 140 % Identity 16% Template c2vzhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-dependent fmn reductase; PDBTitle: structures of nadh:fmn oxidoreductase (emob)-fmn complex Resolution 2.5 Å

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		3	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.																				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure													.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	T	L	I	S	G	S	T	L	G	.	.	G	A	E	Y	V	A	E	H	L	A	E	K	L	E	E	A	.	G	F	T	T	E	T	L	H	G	P	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	P	A	S	G	I	W	L	V	I	S	S	T	H	G	A	G
Query Conservation													.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																															.
Template Sequence		S	I	V	A	I	S	G	S	P	S	R	N	S	T	T	A	K	L	A	E	Y	A	L	A	H	V	L	A	R	S	D	S	Q	G	R	H	I	H	V	I	D	L	D	P	K	A	L	L	R	G	D	L	S	N	A	K	L	K	E	A	V	D	A	T	C	N	A	D	G	L	I	V	A	T	P	I	Y	.	K	A
Template Known Secondary structure										S	S	S	S																T	T	S	S								G	G	G	S								T		T	T	S														S									B	.	T	T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		D	I	P	D	N	L	S	P	F	Y	E	A	L	Q	E	Q	K	P	D	L	S	A	V	R	F	G	A	I	G	I	G	S	R	E	Y	D	T	F	C	G	A	I	D	K	L	E	A	E	L	K	N	S	G	A	K	Q	T	G	E	T	L	K	I	N	I	L	D	H	.	.	.	.	.	.	D	I	P	E	D	P
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																				.	.												.																																					.	.	.	.	.	.
Template Conservation																				.	.												.
Template Sequence		S	Y	T	G	L	L	K	A	F	L	D	I	L	P	Q	F	A	L	.	.	A	G	K	A	A	L	P	L	A	T	G	.	G	S	P	A	H	V	L	A	L	D	Y	G	L	R	P	V	L	H	S	M	G	V	R	H	V	V	Q	S	F	F	L	V	Q	S	Q	F	S	V	V	D	G	K	L	A	V	E	D	D
Template Known Secondary structure		B										T	T	S		T	T	T	T	.	.	B	T										.	S	S	G	G	G	G	G													T	T	B	S										S	T	T			S	S	S	S	S	S	S	S
Template Predicted Secondary structure																				.	.												.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	E	W	L	G	S	W	V	N	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	S	Q	L	N	N	A	I	D	H	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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