Job Description P03817 Confidence 24.61% Date Thu Jan 5 10:58:00 GMT 2012 Rank 217 Aligned Residues 73 % Identity 14% Template c2dmwA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:synaptobrevin-like 1 variant; PDBTitle: solution structure of the longin domain of synaptobrevin-2 like protein 1 Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	T	L	I	S	G	S	T	L	G	G	A	E	Y	V	A	E	H	L	A	E	K	L	E	E	A	G	F	T	T	E	T	L	H	G	P	L	L	E	D	L	P	A	S	G	I	W	L	V	I	S	S	T	H	G	A	G	D	I	P	D	N	L	S	P	F	Y	E	A	L	Q	E
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		T	T	I	L	A	K	H	A	W	C	G	G	N	F	L	E	V	T	E	Q	I	L	A	K	I	P	S	E	N	N	K	L	T	Y	S	H	G	N	Y	L	F	H	Y	I	C	Q	D	R	I	V	Y	L	C	I	T	D	.	D	D	F	E	R	S	R	A	F	N	F	L	N	E	I	K	K
Template Known Secondary structure		T									S	S	S											T	T	S		S	S	S								T	T									T	T									.	S	S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions