Job Description P39367 Confidence 99.39% Date Thu Jan 5 11:59:58 GMT 2012 Rank 184 Aligned Residues 137 % Identity 15% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		H	R	I	H	N	P	F	.	.	T	E	E	K	Y	A	T	L	G	R	V	L	R	M	K	P	G	T	R	I	L	D	L	G	S	G	S	G	E	M	L	C	T	W	A	R	D	H	G	I	T	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R	A	E	E	L	G	V	S	E	R	V	H	F	I
Query Conservation									.	.
Alig confidence									.	.													.	.																									.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																									.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		M	D	W	Y	E	P	G	E	D	T	Y	T	L	M	D	A	L	E	R	E	G	.	.	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	K	R	N	.	.	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R	G	G	.	.	.	.	.	.	.	.	.	.	N	L	V
Template Known Secondary structure				S																		T	.	.			S							T		T	T								T	T	T	S	.	.							S							T		S	S	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																									.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.											.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		H	N	D	A	A	G	Y	V	A	N	E	K	C	D	V	A	A	C	.	.	.	.	.	.	.	.	.	V	G	A	T	W	I	A	G	G	F	A	G	A	E	E	L	L	A	Q	S	L	K	P	G	G	I	M	L	I	G	E	P	Y	W	R	Q	L	P	A	T	E	E	I	A	Q	A	C	G	V	S	S	T	S
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	D	L	L	C	S	I	N	Q	E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	R	E	V	I	D	R	F	V	D	A	V	T	V	G	M	L	Y	L	L	V	I	E	A	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	T	T	T	T	S		G	G	G		S									B	T	T				T	T	T	B			G	G	G													S	S								G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	L	T	L	P	G	L	V	G	A	F	D	D	L	G	Y	D	V	V	E	M	V	L
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	P	K	E	V	L	A	R	L	E	E	R	G	Y	G	T	R	I	L	K	V
Template Known Secondary structure		.	.	.	.											T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions