Job Description P39367 Confidence 99.66% Date Thu Jan 5 11:59:58 GMT 2012 Rank 121 Aligned Residues 169 % Identity 13% Template c3p9kD_ PDB info PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde Resolution 2.25 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																												.																											.
Query SS confidence																												.																											.
Query Sequence		T	I	S	E	S	E	H	R	I	H	N	P	F	T	E	E	K	Y	A	T	L	G	R	V	L	R	.	M	K	P	G	T	R	I	L	D	L	G	S	G	S	G	E	M	L	C	T	W	A	R	D	H	G	.	I	T	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R	A	E	E	L	G	V	S
Query Conservation																												.																											.
Alig confidence																												.																											.												.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence		R	F	N	R	V	F	N	E	G	M	K	N	H	S	I	I	I	T	K	K	L	L	E	L	Y	H	G	F	E	G	L	G	T	L	V	D	V	G	G	G	V	G	A	T	V	A	A	I	A	A	H	Y	P	T	I	K	G	V	N	F	D	L	P	H	V	.	.	.	.	.	.	.	.	I	S	E	A	P	Q	F
Template Known Secondary structure																												T	T	T	T		S						T		T	T	S											T	T												.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																																							.	.	.	.	.
Query SS confidence																																					.	.																																							.	.	.	.	.
Query Sequence		E	R	V	H	F	I	H	N	D	A	A	G	Y	V	A	N	E	K	C	D	V	A	A	C	V	G	A	T	W	I	A	G	G	F	A	.	.	G	A	E	E	L	L	A	Q	S	L	K	P	G	G	I	M	L	I	G	E	P	Y	W	R	Q	L	P	A	T	E	E	I	A	Q	A	C	G	V	.	.	.	.	.
Query Conservation																																					.	.																																							.	.	.	.	.
Alig confidence																	.	.																			.	.																																							.	.	.	.	.
Template Conservation																	.	.
Template Sequence		P	G	V	T	H	V	G	G	D	M	F	K	E	V	P	.	.	S	G	D	T	I	L	M	K	W	I	L	H	D	W	S	D	Q	H	C	A	T	L	L	K	N	C	Y	D	A	L	P	A	H	G	K	V	V	L	V	Q	C	I	L	P	V	N	P	E	A	N	P	S	S	Q	G	V	F	H	V	D	M	I	M
Template Known Secondary structure		T	T						S		T	T	T				.	.			S						S		G	G	G	B																S		T	T										B		S	S			S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
					159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	S	T	S	D	F	L	T	L	P	G	L	V	G	A	F	D	D	L	G	Y	D	V	V	E	M	V	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	A	H	N	P	G	G	R	E	R	Y	E	R	E	F	Q	A	L	A	R	G	A	G	F	T	G	V	K	S	T	Y
Template Known Secondary structure					S	S	B					B												T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions