Job Description P39367 Confidence 99.68% Date Thu Jan 5 11:59:58 GMT 2012 Rank 106 Aligned Residues 166 % Identity 14% Template c3p2kA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase Resolution 2.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90
Predicted Secondary structure																																																	.																									.	.	.
Query SS confidence																																																	.																									.	.	.
Query Sequence		R	I	H	N	P	F	T	E	E	K	Y	A	T	L	G	R	V	L	R	M	K	P	G	T	R	I	L	D	L	G	S	G	S	G	E	M	L	C	T	W	A	R	D	H	G	I	T	.	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R	A	E	E	L	G	V	S	.	.	.	E	R	V	H	F
Query Conservation																																																	.																									.	.	.
Alig confidence																		.	.	.	.																												.																									.	.	.
Template Conservation																		.	.	.	.
Template Sequence		T	K	T	V	D	L	S	K	D	E	L	T	E	I	I	G	.	.	.	.	Q	F	D	R	V	H	I	D	L	G	T	G	D	G	R	N	I	Y	K	L	A	I	N	D	Q	N	T	F	Y	I	G	I	D	P	V	K	E	N	L	F	D	I	S	K	K	I	I	K	K	P	S	K	G	G	L	S	N	V	V	F
Template Known Secondary structure		T																.	.	.	.	T	S	S							T		T	T	S											T	T								S		G	G	G	G								T	S		G	G	G	T			S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		91	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure									.	.														.	.	.	.										.
Query SS confidence									.	.														.	.	.	.										.
Query Sequence		I	H	N	D	A	A	G	.	.	Y	V	A	N	E	K	C	D	V	A	A	C	V	.	.	.	.	G	A	T	W	I	A	G	G	F	.	A	G	A	E	E	L	L	A	Q	S	L	K	P	G	G	I	M	L	I	G	E	P	Y	W	R	Q	L	P	A	T	E	E	I	A	Q	A	C	G	V	S	S	T	S	D
Query Conservation									.	.														.	.	.	.										.
Alig confidence									.	.														.	.	.	.										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	A	A	A	E	S	L	P	F	E	L	K	N	I	A	D	S	I	S	I	L	F	P	W	G	T	L	L	E	Y	V	I	K	P	N	R	D	I	L	S	N	V	A	D	L	A	K	K	E	A	H	F	E	F	V	T	T	Y	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S			G	G	G	T	T									S											T	T											T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	T	L	P	G	L	V	G	A	F	D	D	L	G	Y	D	V	V	E	M	V	L	A	D	Q	E	G	W	D	R	Y	E	A	A	K	W	L	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	L	S	E	Q	Y	K	A	E	L	S	N	S	G	F	R	I	D	D	V	K	E	L	D	N	E	Y	V	K	Q	F	N	S	L	W	A	K	R	L
Template Known Secondary structure					S									T	T	T											G	G	G	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions