Job Description P39367 Confidence 98.86% Date Thu Jan 5 11:59:58 GMT 2012 Rank 246 Aligned Residues 140 % Identity 17% Template c3m4xA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nol1/nop2/sun family protein; PDBTitle: structure of a ribosomal methyltransferase Resolution 2.28 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		T	E	E	K	Y	A	T	L	G	R	V	L	R	M	K	P	G	T	R	I	L	D	L	G	S	G	S	G	E	M	L	C	T	W	A	R	D	H	G	.	.	I	T	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R	A	E	E	L	G	V	S	E	R	V	H	F	I	H	N	D	A	A	G	Y
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		Q	E	P	S	A	X	I	V	G	T	A	A	A	A	K	P	G	E	K	V	L	D	L	C	A	A	P	G	G	K	S	T	Q	L	A	A	Q	X	K	G	K	G	L	L	V	T	N	E	I	F	P	K	R	A	K	I	L	S	E	N	I	E	R	W	G	V	S	N	A	I	V	T	N	H	A	P	A	E	L	V
Template Known Secondary structure				T	T	T											T	T						S	S		T	T												T	T		S							S	S															T		S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
			99	100	.	.	.	.	.	.	.	.	.																							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	V	A	N	E	K	C	D	V	A	A	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	A	T	W	I	A	G	G	F	A	G	A	E	E	L	L	A	Q	S	L	K	P	G	G	I	M	L	I	G	E	P	Y	W	R	Q	L	P	A	T	E	E	I	A	Q	A
Query Conservation		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	H	F	S	G	F	F	D	R	I	V	V	D	A	P	C	S	G	E	G	X	F	R	K	D	P	N	A	I	K	E	W	T	E	E	S	P	L	Y	C	Q	K	R	Q	Q	E	I	L	S	S	A	I	K	X	L	K	N	K	G	Q	L	I	Y	S	T	C	T	F	A	P	E	E	N	E	E	I	I	S	W	L
Template Known Secondary structure					T	T														G	G	G	T	T	T										T	T																			T												S				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		156	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	V	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	N	Y	P
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions