Job Description P39367 Confidence 97.81% Date Thu Jan 5 11:59:58 GMT 2012 Rank 292 Aligned Residues 115 % Identity 17% Template c3lkzB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase Resolution 2.00 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		T	E	E	K	Y	A	T	L	G	R	V	L	R	M	K	P	G	T	R	I	L	D	L	G	S	G	S	G	E	M	L	C	T	W	A	R	D	H	G	.	I	T	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R	A	E	E	L	G	V	S	E	R	V	H	F	I	H	N	D	A	A	G	Y	V
Query Conservation																																									.
Alig confidence																																									.													.	.
Template Conservation																																																						.	.
Template Sequence		G	T	A	K	L	R	W	L	V	E	R	R	F	L	E	P	V	G	K	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	M	A	T	Q	K	R	V	Q	E	V	R	G	Y	T	K	G	G	P	G	.	.	H	E	E	P	Q	L	V	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	R
Template Known Secondary structure												T	T	S											T		T	T								T	T		T	T											S	T	T	.	.	S								B	T	T	G	G	G						S			T	T	S	S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.														.
Query SS confidence																							.	.	.	.	.	.	.														.
Query Sequence		A	N	E	K	C	D	V	A	A	C	V	G	A	T	W	I	A	G	G	F	A	.	.	.	.	.	.	.	G	A	E	E	L	L	A	Q	S	L	K	P	G	.	G	I	M	L	I
Query Conservation																							.	.	.	.	.	.	.														.
Alig confidence																	.						.	.	.	.	.	.	.														.
Template Conservation																	.
Template Sequence		P	S	E	C	C	D	T	L	L	C	D	I	G	E	S	.	S	S	S	A	E	V	E	E	H	R	T	I	R	V	L	E	M	V	E	D	W	L	H	R	G	P	R	E	F	C	V
Template Known Secondary structure							S										.		S																					T	T
Template Predicted Secondary structure																	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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