Job Description P39367 Confidence 35.94% Date Thu Jan 5 11:59:58 GMT 2012 Rank 437 Aligned Residues 41 % Identity 7% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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		38	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		T	R	I	L	D	L	G	S	G	S	.	G	E	M	L	C	T	W	A	R	D	H	G	I	T	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		M	K	V	I	I	I	G	G	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	G	V	V	I	I	N	K	D	R	E	L	C	E	E	F	A	K	K
Template Known Secondary structure																							T	T								S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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