Job Description P39367 Confidence 98.85% Date Thu Jan 5 11:59:58 GMT 2012 Rank 248 Aligned Residues 124 % Identity 21% Template c3k0bA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase; PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365 Resolution 1.50 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																																								.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	F	T	E	E	K	Y	A	T	L	G	R	V	L	R	M	K	P	G	T	R	I	L	D	L	G	S	G	S	G	E	M	L	C	T	W	A	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	I	K	E	T	X	A	A	A	L	V	L	L	T	S	W	H	P	D	R	P	F	Y	D	P	V	C	G	S	G	T	I	P	I	E	A	A	L	I	G	Q	N	I	A	P	G	F	N	R	E	F	V	S	E	T	W	D	W	X	P	K	Q	V	W	A	D	A	R	Q	E	A	E	D	L	A	N	Y	D	Q
Template Known Secondary structure			S													S				T	T	S					T	T		T	T	S											T	T			T	T	T	T	S			G	G	G	G		T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.
Predicted Secondary structure																																																								.	.	.	.																				.	.
Query SS confidence																																																								.	.	.	.																				.	.
Query Sequence		G	I	T	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R	A	E	E	L	G	V	S	E	R	V	H	F	I	H	N	D	A	A	G	Y	V	A	N	E	K	C	D	V	A	A	C	V	G	A	.	.	.	.	T	W	I	A	G	G	F	A	G	A	E	E	L	L	A	Q	S	L	K	.	.	P
Query Conservation																																																								.	.	.	.																				.	.
Alig confidence																																																								.	.	.	.																				.	.
Template Conservation
Template Sequence		P	L	N	I	I	G	G	D	I	D	A	R	L	I	E	I	A	K	Q	N	A	V	E	A	G	L	G	D	L	I	T	F	R	Q	L	Q	V	A	D	F	Q	T	E	D	E	Y	G	V	V	V	A	N	P	P	Y	G	E	R	L	E	D	E	E	A	V	R	Q	L	Y	R	E	X	G	I	V	Y	K	R	X	P
Template Known Secondary structure										S															T	T		T	T		S							G	G	G							S												S																				T		T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		133	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	M	L	I	G	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	W	S	V	Y	V	L	T	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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