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Job DescriptionP39367
Confidence99.30%DateThu Jan 5 11:59:58 GMT 2012
Rank207Aligned Residues154
% Identity16%Templatec3hp7A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hemolysin, putative; PDBTitle: putative hemolysin from streptococcus thermophilus.
Resolution1.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30..... ....40.........50.........60.........70.........80.........90.........
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Query Sequence  TEEKYATLGRVLRMK. PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV
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Template Sequence  GGLKLEKALAVFNLSVEDXITIDIGASTGGFTDVXLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSXEQYNFRYAEPVD. F
Template Known Secondary structure  TTT


TT
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   66...70.........80.........90.........100.........110.........120.........130.........140... .
 
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Query Sequence  ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG. . . . . . . . . EPYWRQLPATEEIAQACGVSSTSDFLTLPGL
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Template Sequence  TEGLPSFASIDVSFI. . . SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGNGIVRESSIHEKV. . . . . . . . . . LETV
Template Known Secondary structure  TT


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   145....150......... 160.........170.........180.........190.........200....... ..210.
 
   171........180........
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Query Sequence  VGAFDDLGYDVVEMVLAD
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Template Sequence  TAFAVDYGFSVKGLDFSP
Template Known Secondary structure  TT
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   213......220.........230
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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