 |
Job Description | P39367 | Confidence | 99.61% | Date | Thu Jan 5 11:59:58 GMT 2012 |
Rank | 140 | Aligned Residues | 114 |
% Identity | 18% | Template | c3evzA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:methyltransferase; |
PDBTitle: crystal strucure of methyltransferase from pyrococcus furiosus
|
Resolution | 2.20 Å |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | T | L | G | R | V | L | R | M | K | P | G | T | R | I | L | D | L | G | S | G | S | G | E | M | L | C | T | W | A | R | D | H | . |
G | I | T | G | T | G | I | D | M | S | S | L | F | T | A | Q | A | K | R | R | A | E | E | L | G | V | S | E | R | V | H | F | I | H | N | D | A | A | G | Y | V | A | N | E | K |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |   | . |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | R | Y | I | F | L | K | T | F | L | R | G | G | E | V | A | L | E | I | G | T | G | H | T | A | X | X | A | L | X | A | E | K | F | F | N | C | K | V | T | A | T | E | V | D | E | E | F | F | E | Y | A | R | R | N | I | E | R | N | N | S | N | V | R | L | V | K | S | N | G | G | I | I | K | G | V | V | E | G | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|
| S | S |
|  |  |  |  |  |
|
| T | T | T |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |
| S | S |
| S | S | T | T | T |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | D | V | A | A | C | V | G | A | T | W | I | A | G | G | . |
. |
. |
. |
F | A | G | A | E | E | L | L | A | Q | S | L | K | P | G | G | I | M | L | I |
Query Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |   |
| . | . | . | . |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|
Template Sequence |   |
F | D | V | I | F | S | A | P | P | Y | Y | G | G | K | Y | G | E | E | F | S | V | K | L | L | E | E | A | F | D | H | L | N | P | G | G | K | V | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|