Return to main results Retrieve Phyre Job Id

Job DescriptionP39367
Confidence99.84%DateThu Jan 5 11:59:58 GMT 2012
Rank30Aligned Residues164
% Identity14%Templatec3egeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative methyltransferase from antibiotic biosynthesis PDBTitle: crystal structure of putative methyltransferase from antibiotic2 biosynthesis pathway (yp_324569.1) from anabaena variabilis atcc3 29413 at 2.40 a resolution
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  NPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG
Query Conservation            
     
 

 







 
     

      
 
 
                               
Alig confidence 







































.



















......












Template Conservation            
   
    
  








  
  

  .   
                ......             
Template Sequence  RVPDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQ. GLFVYAVEPSIVXRQQAVVH. . . . . . PQVEWFTGYAENL
Template Known Secondary structure  B





TT
T
TTSTT.T

S
SS


......TT


TTS
Template Predicted Secondary structure 















.














......









Template SS confidence 















































































   15....20.........30.........40.........50.... .....60.........70.... .....80.......
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  YVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDL
Query Conservation         
 
          
    
    
 




 
 
                                   
  
Alig confidence 















































































Template Conservation        

 
          
    
 
  






 
                                         
Template Sequence  ALPDKSVDGVISILAIHHFSHLEKSFQEXQRIIRDGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQINLLQEN
Template Known Secondary structure 
S
TT
BSS
GGG
SSB
SS

GGG



GGGGT
TS

Template Predicted Secondary structure 


























Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   178.180........
Predicted Secondary structure 



Query SS confidence 










Query Sequence  GYDVVEMVLAD
Query Conservation 
          
Alig confidence 










Template Conservation             
Template Sequence  TKRRVEAIPFL
Template Known Secondary structure 
S

Template Predicted Secondary structure 





Template SS confidence 










   168.170........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions