Job Description P39367 Confidence 98.85% Date Thu Jan 5 11:59:58 GMT 2012 Rank 247 Aligned Residues 111 % Identity 21% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																								.	.	.
Query SS confidence																																								.																								.	.	.
Query Sequence		E	K	Y	A	T	L	G	R	V	L	R	M	K	P	G	T	R	I	L	D	L	G	S	G	S	G	E	M	L	C	T	W	A	R	D	H	G	I	.	T	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R	A	E	E	L	G	.	.	.	V	S	E	R	V	H	F	I	H	N	D	A	A	G	Y
Query Conservation																																								.																								.	.	.
Alig confidence																.																								.																								.	.	.
Template Conservation																.
Template Sequence		E	V	L	G	H	T	S	L	C	S	H	P	K	P	.	E	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F
Template Known Secondary structure										T	T	S	S			.									T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S
Template Predicted Secondary structure																.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
					99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																						.	.	.	.	.	.
Query SS confidence		.	.	.																						.	.	.	.	.	.
Query Sequence		.	.	.	V	A	N	E	K	C	D	V	A	A	C	V	G	A	T	W	I	A	G	G	F	.	.	.	.	.	.	A	G	A	E	E	L	L	A	Q	S	L	K	P	G	G	I	M	L	I	G
Query Conservation		.	.	.																						.	.	.	.	.	.
Alig confidence		.	.	.													.	.	.	.	.					.	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		V	R	Q	T	P	D	N	T	Y	D	V	V	I	I	D	.	.	.	.	.	T	T	D	P	A	S	K	L	F	G	E	A	F	Y	K	D	V	L	R	I	L	K	P	D	G	I	C	C	N	Q
Template Known Secondary structure				T	S		T	T									.	.	.	.	.		S						S	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions