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Job DescriptionP39367
Confidence98.24%DateThu Jan 5 11:59:58 GMT 2012
Rank281Aligned Residues217
% Identity13%Templatec2eg5C_
PDB info PDB header:transferaseChain: C: PDB Molecule:xanthosine methyltransferase; PDBTitle: the structure of xanthosine methyltransferase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30..... ....40.........50.........60.........70.........80....
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Query Sequence  PFTEEKYATLGRVLRMK. . PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV. . . . . . . . . . . .
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Template Sequence  PVLEQCVRELLRANLPNINKCIKVADLGCASGPNTLLTVRD. . . . . . . . . . . . . IVQSIDKVGQLERPTIQIFLNDLFPN
Template Known Secondary structure  S

TTTTTT

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   34.....40.........50.........60.........70.... .....80.........90.........100
 
   85....90.........100.........110......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . SERVHFIHNDAAGYVANEKCDVAACVGATWIA. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DFNSVFKLLPSFYRKLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELIGTNKGSIYSS
Template Known Secondary structure 
T


TTS

S
TTS

S
TT
S
TTB
SSS
GGGTT


TTSTT
SS

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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   117..120.........130.........140.........150...... ...160.
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Query Sequence  . . . . . . . . . . . . . . . . GGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQAC. . . . . . . . . . . . . . . . . . . GVSST
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Template Sequence  KASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLLTCICKGVELDARNAIDLLEMAINDLVVEGHLEEEKLDSFNLP
Template Known Secondary structure  TTS




TT
B
TTSS
SSTTTT


S
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   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   162.......170........ .180..... ....190.........200...... ...210.........220.........230..
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Query Sequence  SDFLTLPGLVGAFDDLG. YDVVEMV. . . . LADQEGWDRYEAAKWLTMRRW. . . . LEANPDDDFAAEVRAELNIAPKRYVT
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Template Sequence  VYIPSAEEVKCIVEEEGSFEILYLETFKVLYDAGFSHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAAKVLP
Template Known Secondary structure  B




STTTT


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TTSGG
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   267..270.........280.........290.........300.........310.........320.........330.........340......
 
   233......240........
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Query Sequence  YARECFGWGVFALIAR
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Template Sequence  LGKGFYNNLIISLAKK
Template Known Secondary structure  GT
B
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   351........360......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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