Job Description P39367 Confidence 65.10% Date Thu Jan 5 11:59:58 GMT 2012 Rank 389 Aligned Residues 190 % Identity 12% Template c2d3tB_ PDB info PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v Resolution 3.40 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																	.	.																																	.	.	.	.	.	.	.
Query SS confidence																	.	.																																	.	.	.	.	.	.	.
Query Sequence		R	M	K	P	G	T	R	I	L	D	L	G	S	G	S	.	.	G	E	M	L	C	T	W	A	R	D	H	G	I	T	G	T	G	I	D	M	S	S	L	F	T	A	Q	A	K	R	R	A	.	.	.	.	.	.	.	E	E	L	G	V	S	E	R	V	H	F	I	H	N	D	A	A	G	Y	V	A	N	E	K
Query Conservation																	.	.																																	.	.	.	.	.	.	.
Alig confidence																	.	.											.																						.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		I	A	K	D	V	K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	S	K	.	G	T	P	I	L	M	K	D	I	N	E	H	G	I	E	Q	G	L	A	E	A	A	K	L	L	V	G	R	V	D	K	G	R	M	T	P	A	K	M	A	E	V	L	N	G	I	R	P	T	L	S	Y
Template Known Secondary structure		T					S	S							T	T												T	.	T								S	S																				T	T	T	S	S																S	S	G
Template Predicted Secondary structure																													.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	D	V	A	A	C	V	G	A	T	W	I	A	G	G	.	.	.	.	F	A	G	A	E	E	L	L	A	Q	S	L	K	P	G	G	I	M	L	I	G	E	P	Y	W	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	P	A	T	E	E	I	A	Q	A	C	G	V	S	S	T	S
Query Conservation																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	F	G	N	V	D	L	V	V	E	A	V	V	E	N	P	K	V	K	Q	A	V	L	A	E	V	E	N	H	V	R	E	D	A	I	L	A	S	N	T	S	T	I	S	I	S	L	L	A	K	A	L	K	R	P	E	N	F	V	G	M	H	F	F	N	P	V	H	M	M	P	L	V	E	V	I	R	G	E
Template Known Secondary structure		G	G	G	G	G		S								S													T	T	T	S		S	S								S	S	S						T	T	T	S	S		G	G	G								S	S	T	T	T										T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		163	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		D	F	L	.	.	T	L	P	G	L	V	G	A	F	D	D	L	G	Y	D	V	V	E	M	V	L	A	D	Q	E	G	W	D	R	Y	E	A	A	K	W	L	T	M	R	R	W	L	E	A	N	P	D	D	D	F	A	A	E	V	R	A	E	L
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		K	S	S	D	L	A	V	A	T	T	V	A	Y	A	K	K	M	G	K	N	P	I	V	V	N	D	C	P	G	F	L	V	N	R	V	L	F	P	Y	F	G	G	F	A	K	L	V	S	A	G	V	D	F	V	R	I	D	K	V	M	E	K	F
Template Known Secondary structure		T																T	T										T	T	T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions