Job Description P76273 Confidence 33.29% Date Thu Jan 5 12:21:29 GMT 2012 Rank 427 Aligned Residues 96 % Identity 17% Template c3trkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease Resolution 2.40 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	N	V	A	L	T	H	F	D	G	R	V	F	G	A	A	V	P	E	M	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L	V	Y	S
Query Conservation
Alig confidence																						.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	R	G	A	D	Y	T	Y	N	L	E	L	G	L	P	A	T	L	G	.	R	Y	D	L	V	V	I	N	I	H	T	P	.	.	.	.	.	.	.	.	.	.	.	F	R	I	H	H	Y	Q	Q	C	V	D	H	A	X	K	L	Q	X	L	G	G	D	S	L	R	L	L	K	P	G	G	S	L	L	I	R
Template Known Secondary structure		T		S	S		S					G	G	G				G	G	G		.													.	.	.	.	.	.	.	.	.	.	.			S	S																			G	G	G	G
Template Predicted Secondary structure																						.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1193	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.		.	.	.	.	.	.	.	1220	.	.	.	.												.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	T	L	N	Q	E	E	N	E	A	V	C	L	W	L	K	E	T	Y	P	D	A	V	E	F	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	G	Y	A	D	R	T	S	E	R	V	I	C	V	L	G	R	K	F	R	S	S	R	A	L	K	P
Template Known Secondary structure							S												T	T
Template Predicted Secondary structure
Template SS confidence
		1261	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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