Job Description P76273 Confidence 99.75% Date Thu Jan 5 12:21:29 GMT 2012 Rank 23 Aligned Residues 167 % Identity 16% Template c3id5F_ PDB info PDB header:transferase/ribosomal protein/rna Chain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	S	M	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	R	V	M	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	M	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	S	R	C	G	I	S	N	V	A	L	T	H	F	D	G	R	V	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	G	A	I	L	K	G	L	K	T	N	P	I	R	K	G	T	K	V	L	Y	L	G	A	A	S	G	T	T	I	S	H	V	S	D	I	I	E	L	N	G	K	A	Y	G	V	E	F	S	P	R	V	V	R	E	L	L	L	V	A	Q	R	R	P	N	I	F	P	L	L	A	D	A	R	F	P	Q	S	Y
Template Known Secondary structure								T	T		S						T	T							T		T	T	S												T	T	S																							T	T								T	T		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	P	E	M	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L	V	Y	S	T	C	T	L	N	Q	E	E	N	E	A	V	C	L	W	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	V	V	E	N	V	D	V	L	Y	V	D	I	A	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	T	D	I	A	I	Y	N	A	K	F	F	L	K	V	N	G	D	M	L	L	V	I	K	A	V	T	K	D	P	K	E	I	Y	K	T	E	V
Template Known Secondary structure		T	T	T												S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																													S	S	S	S	S	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																									.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	T	Y	P	D	A	V	E	F	L	P	L	G	D	L	F	P	G	A	N	K	A	L	T	E	E	G	F	L	H	V	F	P	Q	I	Y	D	C	E	G	F	F	V	A	R	L	R	K	T
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Sequence		E	K	L	E	N	S	N	F	E	T	I	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	L	D	P	Y	D	.	.	.	K	D	H	A	I	V	L	S	K	Y	K
Template Known Secondary structure						T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	S	.	.	.	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.																	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions