Job Description P76273 Confidence 97.82% Date Thu Jan 5 12:21:29 GMT 2012 Rank 249 Aligned Residues 114 % Identity 20% Template c3fuxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dimethyladenosine transferase; PDBTitle: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in2 complex with 5'-methylthioadenosine in space group p212121 Resolution 1.68 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	D	F	L	Q	L	T	A	P	Y	G	W	T	L	T	P	I	P	W	C	E	E	G	F	W	I	E	R	D	N	E	D	A	L	P	L	G	S	T	A	E	H	L	S	G	L	F	Y	I	Q	E	A	S	S	M	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	R	V	M	D	V	A	A	A	P
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.																.	.			.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.																.	.			.
Template Sequence		S	P	Q	S	V	R	A	L	L	E	R	H	G	L	F	A	D	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	Q	N	.	.	.	.	.	.	.	F	L	V	S	E	A	H	L	R	R	I	V	E	A	A	.	.	R	P	.	F	T	G	P	V	F	E	V	G	P	G	L
Template Known Secondary structure													T	T					G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T			.	.	.	.	.	.	.																.	.			.			S								T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.																.	.			.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																			.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.		.	.	.	.	50	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	K	T	T	Q	I	S	A	R	M	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	S	R	C	G	I	S	N	V	A	L	T	H	F	D	G	R	V	F	G	A	A	V	P	E	M	F	D	A	I	L	L	D	A	P
Query Conservation
Alig confidence												.	.	.																					.	.	.
Template Conservation												.	.	.																					.	.	.
Template Sequence		G	A	L	T	R	A	L	L	E	A	.	.	.	G	A	E	V	T	A	I	E	K	D	L	R	L	R	P	V	L	E	E	T	.	.	.	L	S	G	L	P	V	R	L	V	F	Q	D	A	L	L	Y	P	W	E	E	V	P	Q	G	S	L	L	V	A	N	L	P
Template Known Secondary structure		S									T	.	.	.	T								S		G	G	G								.	.	.	T	T	T	S							S		G	G	G	S		G	G	G	S		T	T
Template Predicted Secondary structure												.	.	.																					.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions