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Job DescriptionP76273
Confidence97.47%DateThu Jan 5 12:21:29 GMT 2012
Rank267Aligned Residues145
% Identity22%Templatec3adnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli.
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  MLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAV
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Template Sequence  MMTHVPLLAHGHA. KHVLIIGGGDGAMLREVTRH. KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIVN. QT
Template Known Secondary structure  SS

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   66...70........ .80.........90........ .100.........110.........120.........130.........140 ..
 
   185....190.........200.........210.........220.........230.........240......... 250.........260..
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Query Sequence  PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL. . NQEENEAVCLWLK
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Template Sequence  SQTFDVIISDCTSA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . FYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLS
Template Known Secondary structure  T




TT.............................T
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   149150.........160.. .......170.........180.........190.........
 
   263......270.........280.
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Query Sequence  ETYPDAVEFLPLGDLFPGA
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Template Sequence  HYFSDVGFYQAAIPTYYGG
Template Known Secondary structure  TT
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   211........220.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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