Job Description P76273 Confidence 99.57% Date Thu Jan 5 12:21:29 GMT 2012 Rank 46 Aligned Residues 177 % Identity 16% Template c2yvlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi from aquifex2 aeolicus Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		H	L	S	G	L	F	Y	I	Q	E	A	S	S	M	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	R	V	M	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	M	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	S	R	C	G	I	.	S	N	V
Query Conservation																																																																														.
Alig confidence																	.	.				.	.																										.	.	.																											.
Template Conservation																	.	.				.	.																										.	.	.
Template Sequence		R	K	T	Q	I	I	Y	P	K	D	S	F	Y	I	A	.	.	L	K	L	.	.	N	L	N	K	E	K	R	V	L	E	F	G	T	G	S	G	A	L	L	A	V	L	S	E	V	.	.	.	A	G	E	V	W	T	F	E	A	V	E	E	F	Y	K	T	A	Q	K	N	L	K	K	F	N	L	G	K	N	V
Template Known Secondary structure			S	S													.	.			T	.	.	T			T	T									T	T	S										.	.	.	S	S							S	S														T	T			T	T
Template Predicted Secondary structure																	.	.				.	.																										.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	H	F	D	G	R	V	F	G	A	A	V	P	E	M	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L	V	Y	S	T	C	T	L	N
Query Conservation
Alig confidence													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		K	F	F	N	V	D	F	K	D	A	E	.	V	P	E	G	I	F	H	A	A	F	V	D	V	R	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	H	Y	L	E	K	V	H	K	S	L	M	E	G	A	P	V	G	F	L	L	P	.	.	.
Template Known Secondary structure						S		T	T	T	S		.			T	T		B	S						S	S		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G								B		T	T								S	.	.	.
Template Predicted Secondary structure													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	E	N	E	A	V	C	L	W	L	K	E	T	Y	P	D	A	V	E	F	L	P	L	G	D	L	F	P	G	A	N	K	A	L	T	E	E	G	F	L	H	V	F	P	Q	I	Y	D	C	E	G	F	F	V	A	R	L	R	K	T	Q
Query Conservation
Alig confidence		.	.	.																										.	.																							.
Template Conservation		.	.	.																										.	.																							.
Template Sequence		.	.	.	T	A	N	Q	V	I	K	L	L	E	S	I	E	N	Y	F	G	N	L	E	V	V	E	I	L	.	.	H	R	H	Y	K	T	I	S	E	R	F	R	P	E	D	Q	M	V	A	H	T	A	.	Y	L	V	F	G	R	K	L	K
Template Known Secondary structure		.	.	.	S												T	T	T											.	.				B				G	G	G			B		S						S		.
Template Predicted Secondary structure		.	.	.																										.	.																							.
Template SS confidence
					192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions