Job Description P76273 Confidence 99.04% Date Thu Jan 5 12:21:29 GMT 2012 Rank 101 Aligned Residues 159 % Identity 16% Template c2vduE_ PDB info PDB header:transferase Chain: E: PDB Molecule:trna (guanine-n(7)-)-methyltransferase; PDBTitle: structure of trm8-trm82, the yeast trna m7g methylation2 complex Resolution 2.40 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.																				.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.																				.	.
Query Sequence		N	A	P	Q	R	V	M	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	M	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	S	R	.	.	.	.	.	.	.	.	C	G	I	S	N	V	A	L	T	H	F	D	G	R	V	F	G	A	A	.	.	V	P
Query Conservation																																																			.	.	.	.	.	.	.	.																				.	.
Alig confidence																									.																										.	.	.	.	.	.	.	.																				.	.
Template Conservation																									.
Template Sequence		T	K	K	V	T	I	A	D	I	G	C	G	F	G	G	L	M	I	D	L	S	P	A	.	F	P	E	D	L	I	L	G	M	E	I	R	V	Q	V	T	N	Y	V	E	D	R	I	I	A	L	R	N	N	T	A	S	K	H	G	F	Q	N	I	N	V	L	R	G	N	A	M	K	F	L	P	N	F	F	E	K
Template Known Secondary structure		S									T		T	T	S										.		T	T	S							S																		T		S	S	S	S	T	T	T	T																S		T
Template Predicted Secondary structure																									.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L	V	Y	S	T	C	T	L	N	Q	E	E	N	E	A	V	C	L	W	L	K	E	T	Y
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		G	Q	L	S	K	M	F	F	C	F	P	D	P	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	N	T	L	L	S	E	Y	A	Y	V	L	K	E	G	G	V	V	Y	T	I	T	D	V	.	.	.	K	D	L	H	E	W	M	V	K	H	L	E	E	H
Template Known Secondary structure		T									S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T																				S		.	.	.														S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.																								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	V	E	F	L	P	L	G	D	L	F	P	G	A	N	K	A	L	T	E	E	G	F	L	H	V	F	P	Q	I	Y	D	C	E	G	F	F	V	A	R	L	R	K	T	Q	A
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	F	E	R	L	S	K	E	W	E	E	N	D	E	C	V	K	I	M	R	N	A	T	D	K	.	.	.	.	.	.	.	.	.	.	.	.	F	V	A	C	F	T	R	L	P	T
Template Known Secondary structure		T	T											T									T					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.													.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions