Job Description P76273 Confidence 67.90% Date Thu Jan 5 12:21:29 GMT 2012 Rank 364 Aligned Residues 77 % Identity 14% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.
Predicted Secondary structure												.											.	.	.	.	.	.											.																													.	.	.	.	.
Query SS confidence												.											.	.	.	.	.	.											.																													.	.	.	.	.
Query Sequence		R	V	M	D	V	A	A	A	P	G	.	S	K	T	T	Q	I	S	A	R	M	.	.	.	.	.	.	N	N	E	G	A	I	L	A	N	E	.	F	S	A	S	R	V	K	V	L	H	A	N	I	S	R	C	G	I	S	N	V	A	L	T	H	F	D	G	.	.	.	.	.	R	V	F	G	A	A	V	P	E
Query Conservation												.											.	.	.	.	.	.											.																													.	.	.	.	.
Alig confidence												.											.	.	.	.	.	.											.																													.	.	.	.	.
Template Conservation
Template Sequence		N	V	I	L	L	V	G	I	Q	G	S	G	K	T	T	T	A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	E	T	R	T	K	S	P	V	D	I	V	K	E	G	M	E	K	F	K
Template Known Secondary structure										S	S	S	S	T	T																							S				T	T	G	G	G	S	S							S	S							S	S	S			S	S	S	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		187	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	D	A	I	L	L	D	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	D	V	L	I	I	D	T	A
Template Known Secondary structure		S		S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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