 |
Job Description | P76273 | Confidence | 96.78% | Date | Thu Jan 5 12:21:29 GMT 2012 |
Rank | 282 | Aligned Residues | 124 |
% Identity | 15% | Template | c2qe6B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:uncharacterized protein tfu_2867; |
PDBTitle: crystal structure of a putative methyltransferase (tfu_2867) from2 thermobifida fusca yx at 1.95 a resolution
|
Resolution | 1.95 Å |
|
 |
  |   |
119 | 120 | . | . | . | . | . | . | . | |
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | |
|
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
| . |
. |
Query Sequence |   |
Q | R | V | M | D | V | A | A | A | . |
. |
P | G | S | K | T | T | Q | I | S | A | R | M | N | N | E | G | A | I | L | A | N | E | F | S | A | S | R | V | K | V | L | H | A | N | I | S | R | C | G | I | S | N | V | A | L | T | H | F | D | G | R | V | F | G | A | A | V | P | . |
. |
. |
. |
. |
E | M | F | D | . |
. |
Query Conservation |   |
  |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . |   |   |
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
| . | . |
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|   |
|
|
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   | . | . |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
S | Q | F | L | D | L | G | S | G | L | P | T | V | Q | N | T | H | E | V | A | Q | S | V | N | P | D | A | R | V | V | Y | V | D | I | D | P | X | V | L | T | H | G | R | A | L | L | A | K | D | P | . |
. |
N | T | A | V | F | T | A | D | V | R | D | P | E | Y | I | L | N | H | P | D | V | R | R | X | I | D | F | S |
Template Known Secondary structure |   |
|  |  |  |  |  | T |
|
| S |
|
| S | S |
|  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | . | . | T |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  | T | S |  |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
A | I | L | L | D | A | P | C | S | G | E | G | V | V | R | K | D | P | D | A | L | K | N | W | S | P | E | S | N | Q | E | I | A | A | T | Q | R | E | L | I | D | S | A | F | H | A | L | R | P | G | G | T | L | V | Y | S | T | C | T | L | N | Q | E | E | N | E | A | V | C | L | W | L | K | E | T |
Query Conservation |   |
. | . | . |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |
Alig confidence |   |
. | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|   |
|   |
| . | . | . | . | . | . |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | P | A | A | I | X | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | G | X | L | H | Y | L | S | P | . |
. |
. |
. |
. |
. |
D | V | V | D | R | V | V | G | A | Y | R | D | A | L | A | P | G | S | Y | L | F | X | T | S | L | V | D | T | G | L | P | A | Q | Q | K | L | A | R | I | T | R | E |
Template Known Secondary structure |   |
S |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | G | G | G | S |
| T | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  |  |  | B |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 170 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|