Job Description P76273 Confidence 96.81% Date Thu Jan 5 12:21:29 GMT 2012 Rank 281 Aligned Residues 130 % Identity 18% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.													.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	N	A	P	Q	R	V	M	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	M	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	S	R	C	G	.	.	.	.	.	.	.	.	.	.	.	.	I	S	N	V	A	L	T	H	F	D	G	R	V	F	G
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	.	K	N	V	Q	E	V	R	G	Y	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	P	G	H	E	E	P	M	L	M	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F
Template Known Secondary structure		S											T		T	T	S							T	T	S	.	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S								S	T	T	G	G	G						S			G	G
Template Predicted Secondary structure																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.																.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		A	A	V	P	E	M	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	.	G	T	L	V	Y	S	T	C	T	L	N	Q	E	E	N	E	A	V	C	L	W
Query Conservation																																																												.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	P	S	E	I	S	D	T	L	L	C	D	I	G	E	S	S	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	I	E	E	Q	R	T	L	R	I	L	E	M	V	S	D	W	L	S	R	G	P	K	E	F	C	I	K	I	L	C	P	Y	M	P	K	V	I	E	K	L	E	S
Template Known Secondary structure		G	S						S											S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T			S							S		T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	T	Y	P	D	A	V	E	F	L	P	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	R	R	F	G	G	G	L	V	R	V	P	L	S
Template Known Secondary structure														T	T	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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