Job Description P76273 Confidence 97.49% Date Thu Jan 5 12:21:29 GMT 2012 Rank 266 Aligned Residues 131 % Identity 15% Template c2p38A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:protein involved in ribosomal biogenesis; PDBTitle: crystal structure of pyrococcus abyssi protein homologue of2 saccharomyces cerevisiae nip7p Resolution 1.80 Å

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		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.	.	.	390	.	.	.	.						.	.	.	.	.	400	.	.
Predicted Secondary structure																																			.																	.	.																.	.	.	.	.
Query SS confidence																																			.																	.	.																.	.	.	.	.
Query Sequence		P	V	K	D	R	E	A	G	Q	I	R	Q	A	A	T	G	V	G	L	N	W	D	E	N	L	R	L	W	Q	R	D	K	E	.	L	W	L	F	P	V	G	I	E	A	L	I	G	K	V	R	.	.	F	S	R	L	G	I	K	L	A	E	T	H	N	K	G	.	.	.	.	.	Y	R	W	Q	H	E	A	V
Query Conservation																																			.																	.	.																.	.	.	.	.
Alig confidence																																			.																	.	.																.	.	.	.	.
Template Conservation
Template Sequence		R	A	S	S	W	E	L	D	L	I	L	K	E	A	E	K	Y	G	E	L	L	H	E	F	F	C	V	V	E	G	K	Y	R	D	V	Y	A	V	N	E	E	V	W	K	I	I	E	D	I	N	M	R	P	Y	S	L	G	T	F	V	G	T	I	R	V	D	E	N	L	V	E	K	F	Y	P	N	L	E	F	F
Template Known Secondary structure																	T	T													S	S	S														T	T	T					G	G	G	T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.							.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.					.	.	.	460	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																										.	.	.	.
Query SS confidence																															.	.	.	.	.	.																										.	.	.	.
Query Sequence		I	A	L	A	S	P	D	N	M	N	A	F	E	L	T	P	Q	E	A	E	E	W	Y	R	G	R	D	V	Y	.	.	.	.	.	.	P	Q	A	A	P	V	A	D	D	V	L	V	T	F	Q	H	Q	P	I	G	L	A	K	R	I	.	.	.	.	G	S	R	L	K	N	S
Query Conservation																															.	.	.	.	.	.																										.	.	.	.
Alig confidence						.	.																								.	.	.	.	.	.																										.	.	.	.
Template Conservation						.	.
Template Sequence		S	L	I	K	.	.	L	E	K	N	Y	V	I	L	G	P	K	A	S	F	L	F	T	T	G	K	D	A	P	K	E	A	V	R	E	I	K	W	Q	G	S	K	R	V	V	V	L	N	D	L	G	D	I	I	G	I	G	L	I	N	P	K	S	D	R	R	F	I	K	N	L
Template Known Secondary structure		T	T			.	.			S	S														T	T			B		G	G	G							S	S		S							T	T	S										T	T		S	T	T	S
Template Predicted Secondary structure						.	.
Template SS confidence
		89	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions