Job Description P76273 Confidence 97.50% Date Thu Jan 5 12:21:29 GMT 2012 Rank 265 Aligned Residues 137 % Identity 14% Template c1sqwA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:saccharomyces cerevisiae nip7p homolog; PDBTitle: crystal structure of kd93, a novel protein expressed in the2 human pro Resolution 1.90 Å

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		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.									.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.				.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																								.	.	.													.
Query SS confidence																											.	.	.	.	.	.	.	.																								.	.	.													.
Query Sequence		P	V	K	D	R	E	A	G	Q	I	R	Q	A	A	T	G	V	G	L	N	W	D	E	N	L	.	.	.	.	.	.	.	.	R	L	W	Q	R	D	K	E	L	W	L	F	P	V	G	I	E	A	L	I	G	K	V	.	.	.	R	F	S	R	L	G	I	K	L	A	E	T	.	H	N	K	G	Y	R	W	Q
Query Conservation																											.	.	.	.	.	.	.	.																								.	.	.													.
Alig confidence																											.	.	.	.	.	.	.	.																								.	.	.													.
Template Conservation
Template Sequence		P	L	T	E	E	E	T	R	V	M	F	E	K	I	A	K	Y	I	G	E	N	L	Q	L	L	V	D	R	P	D	G	T	Y	C	F	R	L	H	N	D	R	V	Y	Y	V	S	E	K	I	M	K	L	A	A	N	I	S	G	D	K	L	V	S	L	G	T	C	F	G	K	F	T	K	T	H	K	F	R	L	H
Template Known Secondary structure																				G	G	G	T							T	T									T	T												T	T	T	S	S									S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430									.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.													.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	A	V	I	A	L	A	S	P	D	N	M	N	A	F	E	L	T	P	Q	E	A	E	E	W	Y	R	G	R	D	V	.	.	.	.	.	.	.	.	Y	P	Q	A	A	P	V	A	D	D	V	L	V	T	F	Q	H	Q	P	I	G	L	A	K	R	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S
Query Conservation																																		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																						.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		V	T	A	L	D	Y	L	A	P	Y	.	A	K	Y	K	V	W	I	K	P	G	A	E	Q	S	F	L	Y	G	N	H	V	L	K	S	G	L	G	R	I	T	E	N	T	S	Q	Y	Q	G	V	V	V	Y	S	M	A	D	I	P	L	G	F	G	V	A	A	K	S	T	Q	D	C	R	K	V	D	P	M	A	I
Template Known Secondary structure		G	G	G					G	G	G	.		S														T	T	T					G	G	G						T	T			T	T								T	T										S	S								S		T	T	S
Template Predicted Secondary structure												.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		459	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	K	N	S	Y	P	R	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	F	H	Q	A	D	I	G	E
Template Known Secondary structure									G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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