Return to main results Retrieve Phyre Job Id

Job DescriptionA5A616
Confidence1.93%DateWed Jan 25 15:20:02 GMT 2012
Rank26Aligned Residues11
% Identity64%Templatec2ariA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:envelope polyprotein gp160; PDBTitle: solution structure of micelle-bound fusion domain of hiv-12 gp41
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20......
Predicted Secondary structure 
Query SS confidence 










Query Sequence  LFSGFLAAYFS
Query Conservation 










Alig confidence 










Template Conservation   




 



Template Sequence  LFLGFLGAAGS
Template Known Secondary structure 
Template Predicted Secondary structure 



Template SS confidence 










   8.10........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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