Job Description P0AFG8 Confidence 99.91% Date Thu Jan 5 11:26:11 GMT 2012 Rank 36 Aligned Residues 303 % Identity 16% Template d2ozla1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.90

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	E	L	E	R	R	I	R	S	A	I	R	W	N	A	I	M	T	V	L	R	A	S	K	K	D	L	E	L	G	G	H	M	A	S	F	Q	S	S	A	T	I	Y	D	V	C	F	N	H	F	F	R	A	R	N	E	Q	D	G	G	D	L	V	Y	F	Q	G	H	I	S	P	G	V	Y	A	R	A	F	L
Query Conservation
Alig confidence																																						.																		.	.	.	.	.	.							.					.	.	.
Template Conservation																																						.																		.	.	.	.	.	.							.					.	.	.
Template Sequence		R	E	D	G	L	K	Y	Y	R	M	M	Q	T	V	R	R	M	E	L	K	A	D	Q	L	Y	K	Q	K	I	I	R	G	F	C	H	L	.	C	D	G	Q	E	A	C	C	V	G	L	E	A	G	I	N	P	.	.	.	.	.	.	T	D	H	L	I	T	.	A	Y	R	A	.	.	.	H	G	F	T	F	T
Template Known Secondary structure																												T	T	S	S		S					.		T	T											T	S		T	.	.	.	.	.	.	T	S					.		S			.	.	.
Template Predicted Secondary structure																																						.																		.	.	.	.	.	.							.					.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.		.	.	90	.				.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	R	L	T	Q	E	Q	L	D	N	F	R	Q	E	V	H	G	N	G	L	S	S	Y	P	H	P	K	L	M	P	E	F	W	Q	F	P	T	V	S	M	G	L	G	P	I	G	A	I	Y	Q	A	K	F	L	K	Y	L	E	H	R	G	L	K	D	T	S	K	Q	T	V	Y	A	F	L	G	D	G	E	M
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		R	G	L	S	V	R	E	I	L	A	E	L	T	G	R	K	G	G	C	A	K	G	K	G	G	S	M	H	M	Y	A	K	N	F	Y	G	G	N	G	I	V	G	A	Q	V	P	L	G	A	G	I	A	L	A	C	K	Y	.	.	.	.	.	.	.	N	G	K	D	E	V	C	L	T	L	Y	G	D	G	A	A
Template Known Secondary structure		T	T											T	T		T	T	S	T	T	T	T	S	S		T	T				B	T	T	B						S	T	T	T															.	.	.	.	.	.	.		T											T	T	G	G
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	E	S	K	G	A	I	T	I	A	T	R	E	K	L	D	N	L	V	F	V	I	N	C	N	L	Q	R	L	D	G	P	V	T	G	N	G	K	I	I	N	E	L	E	G	I	F	E	G	A	G	W	N	V	I	K	V	M	W	G	S	R	W	D	E	L	L	R	K	D	T	S	G	K	L	I	Q	L
Query Conservation
Alig confidence																				.																												.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																												.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	G	Q	I	F	E	A	Y	N	M	A	A	L	W	K	L	P	.	C	I	F	I	C	E	N	N	R	Y	G	M	G	T	S	V	E	R	A	A	A	S	T	D	Y	Y	K	.	.	.	R	G	D	F	I	P	G	L	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G														T	T			.									S			T	T								S				G	G	G	.	.	.	T	T	T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.																												.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.				380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		M	N	E	T	V	D	G	D	Y	Q	T	F	K	S	K	D	G	A	Y	V	R	E	H	F	F	G	K	Y	P	E	T	A	A	L	V	A	D	W	T	D	E	Q	I	W	A	L	N	R	G	G	H	D	P	K	K	I	Y	A	A	F	K	K	A	Q	E	.	.	.	T	K	G	K	A	T	V	I	L	A	H	T
Query Conservation																																																																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	M	D	I	L	C	V	R	E	A	T	R	F	A	A	A	Y	C	R	S	G	K	G	P	I	L	M	E	L	Q	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.									.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.
Query Sequence		I	K	G	Y	G	M	G	D	A	A	E	G	K	N	I	A	H	Q	V	K	K	M	N	M	D	G	V	R	H	I	R	D	R	F	N	V	P	V	S	D	A	D	I	E	K	L	P	Y	I	T	F	P	E	.	.	.	.	.	.	.	.	G	S	E	E	H	T	Y	L	H	A	Q	R	Q	K	L	H	G	Y	L
Query Conservation																																																							.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	Y	H	G	H	E	M	S	D	P	G	V	.	.	.	.	.	.	S	Y	R	T	R	E	E	I	Q	E	V	R	S	K	S	D	.	.	.	.	.	.	.	.	.	.	.	P	I	M	L	L	K	D	R	M	V	N	S	N	L	A	S	V	E	E	L	K	E	I	D	V	E	V	R	K	E	I	E	D	A
Template Known Secondary structure				S	S		S	S	T	T			S		.	.	.	.	.	.	S	S	S														.	.	.	.	.	.	.	.	.	.	.												T	T	S	S
Template Predicted Secondary structure															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.												.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	R	Q	P	N	F	T	E	K	L	E	L	P	S	L	Q	D	F	G	A	L	L	E	E	Q
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		A	Q	F	.	.	.	.	A	T	A	D	P	E	P	P	L	E	E	L	G	Y	H	I	Y	S	S
Template Known Secondary structure					.	.	.	.				S					G	G	G	T	T		S	S	S	S	S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		321	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions