Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFG8
Confidence100.00%DateThu Jan 5 11:26:11 GMT 2012
Rank20Aligned Residues213
% Identity100%Templated2ieaa1
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   472.......480.........490.........500.........510.........520.........530.........540.........550.
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Query Sequence  EKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDR
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Template Sequence  EKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS. . . . . . . . . . .
Template Known Secondary structure 






GGGGS

SS
B
TT
TTTGGGSS
SGGGT

BB
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   471........480.........490.........500.........510.........520.........530.........
 
   552.......560.........570.........580.........590.........600.........610.........620.........630.
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Query Sequence  EQVAYYKEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGR
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Template Sequence  . . . . . . PEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGR
Template Known Secondary structure  ......

BTT

B

S
TTS


GGGSTT

SS
ST
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   540.........550.........560.........570.........580.........590.........600.........610...
 
   632.......640.........650.........660.........670.........680.........690.........700.
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Query Sequence  TTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPA
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Template Sequence  TTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPA
Template Known Secondary structure  TTSTTT
TTT

S
TTSTT

SSSTT





S

B



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   631........640.........650.........660.........670.........680.........690.........700
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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