Job Description P0AFG8 Confidence 99.94% Date Thu Jan 5 11:26:11 GMT 2012 Rank 32 Aligned Residues 308 % Identity 17% Template d2bfda1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.39

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.
Query Sequence		N	T	I	P	V	E	E	Q	P	E	Y	P	G	N	L	E	L	E	R	R	I	R	S	A	I	R	W	N	A	I	M	T	V	L	.	.	.	.	.	.	.	R	A	S	K	K	D	L	E	L	G	G	H	M	A	S	F	Q	S	S	A	T	I	Y	D	V	C	F	N	H	F	F	R	A	R	N	E	Q	D	G
Query Conservation																																				.	.	.	.	.	.	.
Alig confidence														.																						.	.	.	.	.	.	.										.												.	.	.	.	.	.	.	.					.	.	.	.	.	.
Template Conservation														.																																						.												.	.	.	.	.	.	.	.					.	.	.	.	.	.
Template Sequence		Q	I	I	N	P	S	E	D	P	H	L	P	.	K	E	K	V	L	K	L	Y	K	S	M	T	L	L	N	T	M	D	R	I	L	Y	E	S	Q	R	Q	G	R	I	S	F	Y	M	T	N	Y	.	G	E	E	G	T	H	V	G	S	A	A	.	.	.	.	.	.	.	.	A	L	D	N	.	.	.	.	.	.
Template Known Secondary structure			B	S		G	G	G						.																											T	T	S	S	S						T	.	T											.	.	.	.	.	.	.	.	T	S		T	.	.	.	.	.	.
Template Predicted Secondary structure														.																																						.												.	.	.	.	.	.	.	.					.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.									.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		G	D	L	V	Y	F	Q	G	H	I	S	P	G	V	Y	A	R	A	F	L	E	G	R	L	T	Q	E	Q	L	D	N	F	.	.	R	Q	E	V	H	G	N	G	L	S	S	Y	P	H	P	K	L	M	P	E	F	W	Q	F	P	T	V	S	M	G	L	G	P	I	G	A	I	Y	Q	A	K	F	L	K	Y	L
Query Conservation																																		.	.
Alig confidence									.				.	.	.																			.	.																																														.
Template Conservation									.				.	.	.																																																																		.
Template Sequence		T	D	L	V	F	G	Q	.	A	R	E	.	.	.	A	G	V	L	M	Y	R	D	Y	P	L	E	L	F	M	A	Q	C	Y	G	N	I	S	D	L	G	K	G	R	Q	M	P	V	H	Y	G	C	K	E	R	H	F	V	T	I	S	S	P	L	A	T	Q	I	P	Q	A	V	G	A	A	Y	A	A	K	R	.
Template Known Secondary structure		T	S						.	S			.	.	.							T	T												T		T	T		T	T	T	T		S		S	S				B	T	T	T	T	B					S	S	T	T	T															.
Template Predicted Secondary structure									.				.	.	.																																																																		.
Template SS confidence
		106	.	.	.	110	.	.		.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	R	G	L	K	D	T	S	K	Q	T	V	Y	A	F	L	G	D	G	E	M	D	E	P	E	S	K	G	A	I	T	I	A	T	R	E	K	L	D	N	L	V	F	V	I	N	C	N	L	Q	R	L	D	G	P	V	T	G	N	G	K	I	I	N	E	L	E	G	I	F	E	G	A	G	W	N	V	I	K
Query Conservation
Alig confidence		.	.	.	.	.	.																																		.																								.
Template Conservation		.	.	.	.	.	.																																		.																								.
Template Sequence		.	.	.	.	.	.	A	N	A	N	R	V	V	I	C	Y	F	G	E	G	A	A	S	E	G	D	A	H	A	G	F	N	F	A	A	T	L	E	C	.	P	I	I	F	F	C	R	N	N	G	Y	A	I	S	T	P	T	S	E	Q	Y	R	G	.	D	G	I	A	A	R	G	P	G	Y	G	I	M	S	I	R
Template Known Secondary structure		.	.	.	.	.	.		T											T	T	G	G	G	S													T	T		.										S			T	T			G	G	G	T		S	S	.	S	T	T	G	G	G	T	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.																																		.																								.
Template SS confidence
								181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	W	G	S	R	W	D	E	L	L	R	K	D	T	S	G	K	L	I	Q	L	M	N	E	T	V	D	G	D	Y	Q	T	F	K	S	K	D	G	A	Y	V	R	E	H	F	F	G	K	Y	P	E	T	A	A	L	V	A	D	W	T	D	E	Q	I	W	A	L	N	R	G	G	H	D	P	K	K	I	Y	A
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	N	D	V	F	A	V	Y	N
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253																																																																						.	.	.	.	.	.	260	.	.	.
		373	.	.	.	.	.	.				380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.												.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																				.	.	.	.	.	.	.	.	.	.	.				.	.
Query SS confidence									.	.	.																				.	.	.	.	.	.	.	.	.	.	.				.	.
Query Sequence		A	F	K	K	A	Q	E	.	.	.	T	K	G	K	A	T	V	I	L	A	H	T	I	K	G	Y	G	M	G	.	.	.	.	.	.	.	.	.	.	.	D	A	A	.	.	E	G	K	N	I	A	H	Q	V	K	K	M	N	M	D	G	V	R	H	I	R	D	R	F	N	V	P	V	S	D	A	D	I	E	K
Query Conservation									.	.	.																				.	.	.	.	.	.	.	.	.	.	.				.	.
Alig confidence									.	.	.																				.	.	.	.	.	.	.	.	.	.	.				.	.																															.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		A	T	K	E	A	R	R	R	A	V	A	E	N	Q	P	F	L	I	E	A	M	T	Y	R	I	G	S	T	D	H	P	I	S	R	L	R	H	Y	L	L	S	Q	G	W	W	D	E	E	Q	E	K	A	W	R	K	Q	S	R	R	K	V	M	E	A	F	E	Q	A	E	R	K	P	K	P	N	.	.	.	P	N
Template Known Secondary structure														T																											T	T	T	T																												S		B			.	.	.	G	G
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.				.	340
		437	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		L	P	Y	I	T	.	F	P	E	G	S	E	E	H	T	Y	L	H	A	Q	R	Q	K	L	H	G	Y	L	P	S	R	Q	P	N	F
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	L	F	S	D	V	Y	Q	E	M	P	A	Q	L	R	K	Q	Q	E	S	L	A	R	H	L	Q	T	Y	G	E	H	Y	P	L	D
Template Known Secondary structure		G	G	S	T	T	S	S	S	S																				G	G	G	S		G	G
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions