Job Description P0AFG8 Confidence 92.12% Date Thu Jan 5 11:26:11 GMT 2012 Rank 97 Aligned Residues 155 % Identity 12% Template d1ybha2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase Pyr module Resolution 2.50

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		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	N	G	Q	Q	Y	T	P	Q	D	R	E	Q	V	A	Y	Y	K	E	D	E	K	G	Q	I	L	Q	E	G	I	N	E	L	G	A	G	C	S	W
Query Conservation
Alig confidence										.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation										.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Sequence		A	D	I	L	V	E	A	L	.	.	E	R	Q	G	V	E	T	V	F	A	Y	P	G	G	A	S	M	E	I	H	Q	A	L	T	R	S	S	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	V	L	P	.	R	H	E	Q	G	G	V	F	A	A
Template Known Secondary structure										.	.		T	T	T										G	G	G											S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	S	S
Template Predicted Secondary structure										.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template SS confidence
		100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																										.	.	.	140	.		.	.	.	.	.	.	.	.	150	.
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	A	T	S	Y	S	T	N	N	L	P	M	I	P	F	Y	I	Y	Y	S	M	F	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L	N	G	E	G	L	Q	H	E	D	G	H	S	H	I	Q	S	L	T	I	P	N	C	I	S	Y
Query Conservation
Alig confidence													.	.	.	.																						.	.																							.														.
Template Conservation													.	.	.	.																						.	.																							.														.
Template Sequence		E	G	Y	A	R	S	S	G	K	P	G	.	.	.	.	I	C	I	A	T	S	G	P	G	A	T	N	L	V	S	G	L	A	D	A	L	.	.	L	D	S	V	P	L	V	A	I	T	G	Q	V	P	R	R	M	I	G	T	D	A	.	F	Q	E	T	P	I	V	E	V	T	R	S	I	.	T	K	H	N	Y
Template Known Secondary structure									S	S			.	.	.	.						T	T					T	T									.	.			T												G	G	G	T	T	T	T		.	T	T									G	G	G	.	S	S
Template Predicted Secondary structure													.	.	.	.																						.	.																							.														.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.
		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	Y	A	Y	E	V	A	V	I	M	H	D	G	L	E	R	M	Y	G	E	K	Q	E	N	V	Y	Y	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	M	D	V	E	D	I	P	R	I	I	E	E	A	F	F	L	A	T	S	G	R	P	G	P	V	L	V	D	V
Template Known Secondary structure						G	G	G														S	S	S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions