Job Description P0AFG8 Confidence 100.00% Date Thu Jan 5 11:26:11 GMT 2012 Rank 16 Aligned Residues 318 % Identity 25% Template d1itza1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like PP module Resolution 2.30

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		N	L	E	L	E	R	R	I	R	S	A	I	R	W	N	A	I	M	T	V	L	R	A	S	K	K	D	L	E	L	G	G	H	M	A	S	F	Q	S	S	A	T	I	Y	D	V	C	F	N	H	F	F	R	.	.	.	.	A	R	N	E	Q	D	G	G	D	L	V	Y	F	Q	G	H	I	S	P	G	V	Y	A
Query Conservation																																																							.	.	.	.
Alig confidence																										.	.	.	.	.	.																								.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		T	G	E	L	L	E	K	S	V	N	T	I	R	F	L	A	I	D	A	V	E	K	A	N	.	.	.	.	.	.	S	G	H	P	G	L	P	M	G	C	A	P	M	G	H	V	L	Y	D	E	V	M	R	Y	N	P	K	N	P	Y	W	F	N	R	D	R	F	V	L	S	A	G	H	G	C	M	L	Q	Y	A
Template Known Secondary structure																									T	.	.	.	.	.	.		S																			T					T	T		T	T		T	T							S	S	G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		151	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.
Predicted Secondary structure									.	.																																																														.	.	.
Query SS confidence									.	.																																																														.	.	.
Query Sequence		R	A	F	L	E	G	R	.	.	L	T	Q	E	Q	L	D	N	F	R	Q	E	V	H	G	N	G	L	S	S	Y	P	H	P	K	L	M	P	E	F	W	Q	F	P	T	V	S	M	G	L	G	P	I	G	A	I	Y	Q	A	K	F	L	K	Y	L	E	H	R	G	L	K	.	.	.	D	T	S	K	Q	T	V
Query Conservation									.	.																																																														.	.	.
Alig confidence									.	.													.	.																.																																.	.	.
Template Conservation																							.	.																.
Template Sequence		L	L	H	L	A	G	Y	D	S	V	K	E	E	D	L	K	Q	F	R	Q	W	.	.	G	S	R	T	P	G	H	P	E	N	F	E	T	P	G	.	V	E	V	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	L	A	L	A	E	K	H	L	A	A	R	F	N	K	P	D	S	E	I	V	D	H	Y	T
Template Known Secondary structure							T		T	T							T	T	T	T	S	T	.	.	T		S	S		S	S			T	T	T		T	T	.			S				S	T	T																						B	T	T	B
Template Predicted Secondary structure																							.	.																.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	F	L	G	D	G	E	M	D	E	P	E	S	K	G	A	I	T	I	A	T	R	E	K	L	D	N	L	V	F	V	I	N	C	N	L	Q	R	L	D	G	P	V	T	G	N	G	K	I	I	N	E	L	E	G	I	F	E	G	A	G	W	N	V	I	K	V	M	W	G	S	R	W	D	E	L	L	R	K
Query Conservation
Alig confidence																																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	I	L	G	D	G	C	Q	M	E	G	I	A	N	E	A	C	S	L	A	G	H	W	G	L	G	K	L	I	A	F	Y	D	D	N	H	I	S	I	D	G	D	T	E	I	A	F	T	.	.	E	D	V	S	T	R	F	E	A	L	G	W	H	T	I	W	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S													T	T		T	T									S			T	T			G	G	G	T			.	.	S									T	T							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		D	T	S	G	K	L	I	Q	L	M	N	E	T	V	D	G	D	Y	Q	T	F	K	S	K	D	G	A	Y	V	R	E	H	F	F	G	K	Y	P	E	T	A	A	L	V	A	D	W	T	D	E	Q	I	W	A	L	N	R	G	G	H	D	.	.	P	K	K	I	Y	A	A	F	K	K	A	Q	E	T	K	G	K
Query Conservation																																																															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	G	N	T	G	Y	D	D	I	R	A	A	I	K	E	A	K	A	V	T	D	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	T																	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																											229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	V	I	L	A	H	T	I	K	G	Y	G	M	G	D	A	A	E	G	K	N	I	A	H	Q	V	K	K	M	N	M	D	G	V	R	H	I	R	D	R	F	N	V	P	V	S	D	A	D	I	E	K	L	P	Y	I	T	F	P	E	G	S	E	E	H	T	Y	L	H	A	Q	R	Q	K	L	H	G	Y	L
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		P	T	L	I	K	V	T	T	T	I	G	F	G	S	P	N	K	A	.	.	N	S	Y	S	V	H	G	S	A	L	G	A	K	E	V	E	A	T	R	Q	N	L	G	W	P	Y	D	T	F	F	V	P	E	D	V	K	S	H	W	S	R	H	T	P	E	G	A	A	L	E	A	D	W	N	A	K	F	A	E	Y
Template Known Secondary structure											T	T	T	T		T	T	T	T	.	.	T	S	G	G	G	T	S	S															T					T	T											T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	R	Q	P	N	F	T	E	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	K	Y	A	D	D	A	A	T	L
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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