Job Description P0AFG8 Confidence 99.65% Date Thu Jan 5 11:26:11 GMT 2012 Rank 47 Aligned Residues 151 % Identity 17% Template d1ik6a1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	A	F	V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	N	G	Q	Q	Y	T	P	Q	D	R	E	Q	V	A	Y	Y	K	E	D	E	K	G	Q	I	L	Q	E	G	I	N	E	L	G	A
Query Conservation
Alig confidence													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	I	N	M	A	L	H	E	E	.	.	.	M	E	R	D	E	R	V	V	V	L	G	E	L	V	T	E	G	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	F	G	P	E	R	V	I	D	T	P	L	N	E	G	G	I
Template Known Secondary structure													.	.	.					T	T								T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T						S
Template Predicted Secondary structure													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																														.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	S	W	L	A	A	A	T	S	Y	S	T	N	N	L	P	M	I	P	F	Y	I	Y	Y	S	M	F	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L	N	G	E	G	L	Q	H	E	D	G	H	S	H	I	Q	S	L	T	I	P	N
Query Conservation
Alig confidence											.	.	.	.	.	.														.	.	.											.															.	.	.	.	.	.					.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.														.	.	.											.															.	.	.	.	.	.					.	.	.	.	.	.
Template Sequence		L	G	F	A	M	G	M	A	M	.	.	.	.	.	.	A	G	L	K	P	V	A	E	I	Q	F	V	L	.	.	.	G	A	D	E	L	L	N	H	I	A	.	K	L	R	Y	K	A	P	L	V	V	R	T	P	V	.	.	.	.	.	.	G	S	P	E	.	.	.	.	.	.	A	I	F	V	H	T	P	G
Template Known Secondary structure											.	.	.	.	.	.	T	T												.	.	.											.															.	.	.	.	.	.					.	.	.	.	.	.					T		T	T
Template Predicted Secondary structure											.	.	.	.	.	.														.	.	.											.															.	.	.	.	.	.					.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.							.	.	120	.	.	.	.	.
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	S	Y	D	P	A	Y	A	Y	E	V	A	V	I	M	H	D	G	L	E	R	M	Y	G	E	K	Q	E	N	V	Y	Y	Y	I	T	T	L	N	E	N	Y	H	M	P	A	M	P	E	G
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		L	V	V	V	M	P	S	T	P	Y	N	A	K	G	L	L	K	A	A	I	R	.	.	.	.	.	G	D	D	P	V	V	F	L	E	P	K	I	L	Y	R	A	P	R	E	E	V	P	E	G
Template Known Secondary structure									S														.	.	.	.	.	S	S	S								G	G	G	S	S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions