Job Description P0AFG8 Confidence 100.00% Date Thu Jan 5 11:26:11 GMT 2012 Rank 23 Aligned Residues 196 % Identity 15% Template d1gpua2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.86

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		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.		.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	P	S	L	Q	D	F	G	A	L	L	E	E	Q	S	K	E	.	I	S	T	T	I	A	F	V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	N	G	Q	Q	Y	T	P	Q	D	R	E	Q	V
Query Conservation																			.
Alig confidence																			.															.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	A	N	W	E	S	K	L	P	T	Y	T	A	K	D	S	A	V	A	T	R	K	L	S	E	T	V	L	E	D	V	.	.	.	Y	N	Q	L	P	E	L	I	G	G	S	A	D	L	T	P	S	N	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	K	E	A	L	D	F	Q	P	P
Template Known Secondary structure				T	T	G	G	G	G	S					T	T	S			B														.	.	.	T	T	T		T	T						S	S						T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T							T
Template Predicted Secondary structure																																		.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.															390	.	.	.	.	.	.	.	.	.	400
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	Y	K	E	D	E	K	G	Q	I	L	Q	E	G	I	N	E	L	G	A	G	C	S	W	L	A	A	A	T	S	Y	S	T	N	N	L	P	M	I	P	F	Y	I	Y	Y	S	M	F	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L
Query Conservation
Alig confidence																																.	.	.	.																												.	.
Template Conservation																																.	.	.	.																												.	.
Template Sequence		S	S	G	S	G	N	Y	S	G	R	Y	I	R	Y	G	I	R	E	H	A	M	G	A	I	M	N	G	I	S	A	.	.	.	.	F	G	A	N	Y	K	P	Y	G	G	T	F	L	N	F	V	S	Y	A	A	G	A	V	R	L	S	A	.	.	L	S	G	H	P	V	I	W	V	A	T	H	D	S	I	G	V
Template Known Secondary structure		T	T	S	S			T	T								S															.	.	.	.			T	T													G	G	G									.	.			T											S	G	G	G
Template Predicted Secondary structure																																.	.	.	.																												.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430					.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.			.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	E	G	L	Q	H	E	D	G	H	S	H	I	Q	S	L	T	I	P	N	C	I	S	Y	D	P	A	Y	A	Y	E	V	A	V	I	M	H	D	G	L	E	R	M	Y	G	E	K	Q	E	N	V	Y	Y	Y	I	T	T	L	N	E	N	Y	H
Query Conservation
Alig confidence																																																	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		G	E	D	G	P	T	H	Q	P	I	E	T	L	A	H	F	R	S	L	P	N	I	Q	V	W	R	P	A	D	G	N	E	V	S	A	A	Y	K	N	S	L	E	S	K	H	T	P	.	.	.	.	S	I	I	A	L	S	R	Q	N	L	P	Q	L
Template Known Secondary structure			T	T		T	T	T			S	S							T	S	S	S								S															S	S			.	.	.	.							S	S		B
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.					.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions