 |
Job Description | P0AFG8 | Confidence | 29.77% | Date | Thu Jan 5 11:26:11 GMT 2012 |
Rank | 171 | Aligned Residues | 89 |
% Identity | 18% | Template | d1f4pa_ |
SCOP info | Flavodoxin-like
| Flavoproteins
| Flavodoxin-related
|
Resolution | 1.30 |
|
 |
  |   |
725 | . | . | . | . | 730 | |
|
|
. | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . |
Predicted Secondary structure |   |
|
|  |  |  |  | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | V | Q | L | L | . |
. |
. |
G | S | G | S | I | L | R | H | V | R | E | A | A | E | I | L | A | K | D | Y | G | V | G | S | D | V | Y | S | V | T | S | F | T | E | L | A | R | D | G | Q | D | C | E | R | W | N | M | L | H | P | L | E | T | P | R | V | P | Y | I | A | Q | V | M | N | D | A | P | A | V | A | S |
Query Conservation |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|   |   |
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |
|   |
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | K | A | L | I | V | Y | G | S | T | T | G | N | T | E | Y | T | A | E | T | I | A | R | E | L | A | D | A | . |
G | Y | E | V | D | S | R | D | A | A | S | V | E | A | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | F | E | G | F | D | L | V | L | L | G | C | S | T | W | G | D | D | S | I | E | L | Q |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T |
|  |  |  |  |  |  | G | G | G |
|
| S | T | T | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | T |
| S |  |  |  |  |  |  |
|  |  |
| S | S | S |
|  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
  |
  |   |
802 | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | Y | M | K | L | F | A | E | Q | V | R | T | Y | V | P | A | D | D | Y | R | V | L | G | T |
Query Conservation |   |
  |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
Template Sequence |   |
D | D | F | I | P | L | F | D | S | L | E | E | T | G | A | Q | G | R | K | V | A | C | F | G | C |
Template Known Secondary structure |   |
T | T | T |  |  |  |  |  | T | G | G | G | S |
|
| T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|